4V7F

Arx1 pre-60S particle.

4V7F の概要

• エントリーDOI: 10.2210/pdb4v7f/pdb
• EMDBエントリー: 2528
• 分子名称: 25S ribosomal RNA, 60S ribosomal protein L6, 60S ribosomal protein L8, ... (47 entities in total)
• 機能のキーワード: 60s biogenesis, 5s rrna, ribosome
• 由来する生物種: Saccharomyces cerevisiae (yeast); 詳細
• タンパク質・核酸の鎖数: 48
• 化学式量合計: 2240933.30

構造登録者

Leidig, C.,Thoms, M.,Holdermann, I.,Bradatsch, B.,Berninghausen, O.,Bange, G.,Sinning, I.,Hurt, E.,Beckmann, R. (登録日: 2013-12-10, 公開日: 2014-07-09, 最終更新日: 2024-02-28)

主引用文献

Leidig, C.,Thoms, M.,Holdermann, I.,Bradatsch, B.,Berninghausen, O.,Bange, G.,Sinning, I.,Hurt, E.,Beckmann, R.
60S ribosome biogenesis requires rotation of the 5S ribonucleoprotein particle.
Nat Commun, 5:3491-3491, 2014

PubMed Abstract: During eukaryotic ribosome biogenesis, nascent ribosomal RNA (rRNA) forms pre-ribosomal particles containing ribosomal proteins and assembly factors. Subsequently, these immature rRNAs are processed and remodelled. Little is known about the premature assembly states of rRNAs and their structural rearrangement during ribosome biogenesis. Using cryo-EM we characterize a pre-60S particle, where the 5S rRNA and its associated ribosomal proteins L18 and L5 (5S ribonucleoprotein (RNP)) are rotated by almost 180° when compared with the mature subunit. Consequently, neighbouring 25S rRNA helices that protrude from the base of the central protuberance are deformed. This altered topology is stabilized by nearby assembly factors (Rsa4 and Nog1), which were identified by fitting their three-dimensional structures into the cryo-EM density. We suggest that the 5S RNP performs a semicircular movement during 60S biogenesis to adopt its final position, fulfilling a chaperone-like function in guiding the flanking 25S rRNA helices of the central protuberance to their final topology.

PubMed: 24662372
DOI: 10.1038/ncomms4491

実験手法

ELECTRON MICROSCOPY (8.7 Å)