4NFP

Crystal Structure Analysis of the 16mer GCAGNCUUAAGUCUGC containing 8-aza-7-deaza-7-ethynyl Adenosine

Summary for 4NFP

Related4NFO 4NFQ
DescriptorGCAG(A7E)CUUAAGUCUGC, FORMAMIDE (3 entities in total)
Functional Keywordsrna 16mer oligo, 8-aza-7-deaza-7-ethynyladenosine, position 5, rna
Total number of polymer chains3
Total molecular weight15501.43
Authors
Beal, P.A.,Fisher, A.J.,Phelps, K.J.,Ibarra-Soza, J.M.,Zheng, Y. (deposition date: 2013-10-31, release date: 2014-07-02, Last modification date: 2014-09-03)
Primary citation
Phelps, K.J.,Ibarra-Soza, J.M.,Tran, K.,Fisher, A.J.,Beal, P.A.
Click Modification of RNA at Adenosine: Structure and Reactivity of 7-Ethynyl- and 7-Triazolyl-8-aza-7-deazaadenosine in RNA.
Acs Chem.Biol., 9:1780-1787, 2014
PubMed: 24896732 (PDB entries with the same primary citation)
DOI: 10.1021/cb500270x
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.85 Å)
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Structure validation

RfreeClashscoreRSRZ outliersRNA backbone0.259100.80MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 4nfp
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Molmil generated image of 4nfp
rotated about x axis by 90°
Molmil generated image of 4nfp
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 4nfp
no rotation
Molmil generated image of 4nfp
rotated about x axis by 90°
Molmil generated image of 4nfp
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (4nfp.pdb1.gz [29.73 KB])
Coordinate files for Biological unit (4nfp.pdb2.gz [29.5 KB])