4M5E

Tse3 structure

4M5E の概要

• エントリーDOI: 10.2210/pdb4m5e/pdb
• 関連するPDBエントリー: 4M5F 4N7S 4N80 4N88
• 分子名称: Uncharacterized protein, GLYCEROL, CADMIUM ION, ... (5 entities in total)
• 機能のキーワード: toxin, lysozyme fold, hydrolase, persiplasm
• 由来する生物種: Pseudomonas aeruginosa
• タンパク質・核酸の鎖数: 1
• 化学式量合計: 45369.37

構造登録者

Qian, Y. (登録日: 2013-08-08, 公開日: 2014-04-23, 最終更新日: 2024-03-20)

主引用文献

Lu, D.,Shang, G.,Zhang, H.,Yu, Q.,Cong, X.,Yuan, J.,He, F.,Zhu, C.,Zhao, Y.,Yin, K.,Chen, Y.,Hu, J.,Zhang, X.,Yuan, Z.,Xu, S.,Hu, W.,Cang, H.,Gu, L.
Structural insights into the T6SS effector protein Tse3 and the Tse3-Tsi3 complex from Pseudomonas aeruginosa reveal a calcium-dependent membrane-binding mechanism
Mol.Microbiol., 92:1092-1112, 2014

PubMed Abstract: The opportunistic pathogen Pseudomonas aeruginosa uses the type VI secretion system (T6SS) to deliver the muramidase Tse3 into the periplasm of rival bacteria to degrade their peptidoglycan (PG). Concomitantly, P. aeruginosa uses the periplasm-localized immunity protein Tsi3 to prevent potential self-intoxication caused by Tse3, and thus gains an edge over rival bacteria in fierce niche competition. Here, we report the crystal structures of Tse3 and the Tse3-Tsi3 complex. Tse3 contains an annexin repeat-like fold at the N-terminus and a G-type lysozyme fold at the C-terminus. One loop in the N-terminal domain (Loop 12) and one helix (α9) from the C-terminal domain together anchor Tse3 and the Tse3-Tsi3 complex to membrane in a calcium-dependent manner in vitro, and this membrane-binding ability is essential for Tse3's activity. In the C-terminal domain, a Y-shaped groove present on the surface likely serves as the PG binding site. Two calcium-binding motifs are also observed in the groove and these are necessary for Tse3 activity. In the Tse3-Tsi3 structure, three loops of Tsi3 insert into the substrate-binding groove of Tse3, and three calcium ions present at the interface of the complex are indispensable for the formation of the Tse3-Tsi3 complex.

PubMed: 24724564
DOI: 10.1111/mmi.12616

実験手法

X-RAY DIFFRACTION (1.49 Å)