4EJ4

Structure of the delta opioid receptor bound to naltrindole

Summary for 4EJ4

• Entry DOI: 10.2210/pdb4ej4/pdb
• Descriptor: Delta-type opioid receptor, Lysozyme chimera, (4bS,8R,8aS,14bR)-7-(cyclopropylmethyl)-5,6,7,8,14,14b-hexahydro-4,8-methano[1]benzofuro[2,3-a]pyrido[4,3-b]carbazole-1,8a(9H)-diol (2 entities in total)
• Functional Keywords: g-protein coupled receptor, 7 transmembrane receptor, opioid receptor, signaling protein, hydrolase-antagonist complex, hydrolase/antagonist
• Biological source: Mus musculus; More
• Cellular location: Cell membrane ; Multi- pass membrane protein : P32300
• Total number of polymer chains: 1
• Total formula weight: 52048.23

Authors

Granier, S.,Manglik, A.,Kruse, A.C.,Kobilka, T.S.,Thian, F.S.,Weis, W.I.,Kobilka, B.K. (deposition date: 2012-04-06, release date: 2012-05-16, Last modification date: 2024-10-30)

Primary citation

Granier, S.,Manglik, A.,Kruse, A.C.,Kobilka, T.S.,Thian, F.S.,Weis, W.I.,Kobilka, B.K.
Structure of the delta opioid receptor bound to naltrindole
Nature, 485:400-404, 2012

PubMed Abstract: The opioid receptor family comprises three members, the µ-, δ- and κ-opioid receptors, which respond to classical opioid alkaloids such as morphine and heroin as well as to endogenous peptide ligands like endorphins. They belong to the G-protein-coupled receptor (GPCR) superfamily, and are excellent therapeutic targets for pain control. The δ-opioid receptor (δ-OR) has a role in analgesia, as well as in other neurological functions that remain poorly understood. The structures of the µ-OR and κ-OR have recently been solved. Here we report the crystal structure of the mouse δ-OR, bound to the subtype-selective antagonist naltrindole. Together with the structures of the µ-OR and κ-OR, the δ-OR structure provides insights into conserved elements of opioid ligand recognition while also revealing structural features associated with ligand-subtype selectivity. The binding pocket of opioid receptors can be divided into two distinct regions. Whereas the lower part of this pocket is highly conserved among opioid receptors, the upper part contains divergent residues that confer subtype selectivity. This provides a structural explanation and validation for the 'message-address' model of opioid receptor pharmacology, in which distinct 'message' (efficacy) and 'address' (selectivity) determinants are contained within a single ligand. Comparison of the address region of the δ-OR with other GPCRs reveals that this structural organization may be a more general phenomenon, extending to other GPCR families as well.

PubMed: 22596164
DOI: 10.1038/nature11111

Experimental method

X-RAY DIFFRACTION (3.4 Å)