3VYT

Crystal structure of the HypC-HypD-HypE complex (form I inward)

3VYT の概要

• エントリーDOI: 10.2210/pdb3vyt/pdb
• 関連するPDBエントリー: 2Z1C 2Z1D 2Z1E 3VYR 3VYS 3VYU
• 分子名称: Hydrogenase expression/formation protein HypC, Hydrogenase expression/formation protein HypD, Hydrogenase expression/formation protein HypE, ... (7 entities in total)
• 機能のキーワード: [nife] hydrogenase maturation, metal binding protein-transferase complex, metal binding protein/transferase
• 由来する生物種: Thermococcus kodakarensis; 詳細
• タンパク質・核酸の鎖数: 3
• 化学式量合計: 86522.21

構造登録者

Watanabe, S.,Miki, K. (登録日: 2012-10-02, 公開日: 2012-11-28, 最終更新日: 2023-11-08)

主引用文献

Watanabe, S.,Matsumi, R.,Atomi, H.,Imanaka, T.,Miki, K.
Crystal structures of the HypCD complex and the HypCDE ternary complex: transient intermediate complexes during [NiFe] hydrogenase maturation
Structure, 20:2124-2137, 2012

PubMed Abstract: [NiFe] hydrogenase maturation represents one of the most dynamic and sophisticated processes in metallocenter assembly. The Fe(CN)(2)CO moiety of [NiFe] hydrogenases is assembled via unknown transient interactions among specific maturation proteins HypC (metallochaperone), HypD (redox protein), and HypE (cyanide synthesis/donor). Here, we report the structures of the HypC-HypD and HypC-HypD-HypE complexes, providing a view of the transient interactions that take place during the maturation process. HypC binds to the conserved region of HypD through extensive hydrophobic interactions. The ternary complex formation between HypE and the HypCD complex involves both HypC and HypD, rendering the HypE conformation favorable for cyanide transfer. In the complex, the conserved cysteines of HypC and HypD form an Fe binding site. The conserved C-terminal cysteine of HypE can access the thiol redox cascade of HypD. These results provide structural insights into the Fe atom cyanation in the HypCDE complex.

PubMed: 23123111
DOI: 10.1016/j.str.2012.09.018

実験手法

X-RAY DIFFRACTION (2.25 Å)