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3IR8

Red fluorescent protein mKeima at pH 7.0

3IR8 の概要
エントリーDOI10.2210/pdb3ir8/pdb
分子名称Large stokes shift fluorescent protein (2 entities in total)
機能のキーワードbeta barrel, fluorescent protein
由来する生物種Montipora sp. 20
タンパク質・核酸の鎖数2
化学式量合計50206.55
構造登録者
Henderson, J.N.,Osborn, M.F.,Koon, N.,Gepshtein, R.,Huppert, D.,Remington, S.J. (登録日: 2009-08-21, 公開日: 2009-09-08, 最終更新日: 2026-03-18)
主引用文献Henderson, J.N.,Osborn, M.F.,Koon, N.,Gepshtein, R.,Huppert, D.,Remington, S.J.
Excited state proton transfer in the red fluorescent protein mKeima.
J.Am.Chem.Soc., 131:13212-13213, 2009
Cited by
PubMed Abstract: mKeima is an unusual monomeric red fluorescent protein (lambda(em)(max) approximately 620 nm) that is maximally excited in the blue (lambda(ex)(max) approximately 440 nm). The large Stokes shift suggests that the chromophore is normally protonated. A 1.63 A resolution structure of mKeima reveals the chromophore to be imbedded in a novel hydrogen bond network, different than in GFP, which could support proton transfer from the chromophore hydroxyl, via Ser142, to Asp157. At low temperatures the emission contains a green component (lambda(em)(max) approximately 535 nm), enhanced by deuterium substitution, presumably resulting from reduced proton transfer efficiency. Ultrafast pump/probe studies reveal a rising component in the 610 nm emission with a lifetime of approximately 4 ps, characterizing the rate of proton transfer. Mutation of Asp157 to neutral Asn changes the chromophore resting charge state to anionic (lambda(ex)(max) approximately 565 nm, lambda(em)(max) approximately 620 nm). Thus, excited state proton transfer (ESPT) explains the large Stokes shift. This work unambiguously characterizes green emission from the protonated acylimine chromophore of red fluorescent proteins.
PubMed: 19708654
DOI: 10.1021/ja904665x
主引用文献が同じPDBエントリー
実験手法
X-RAY DIFFRACTION (1.63 Å)
構造検証レポート
Validation report summary of 3ir8
検証レポート(詳細版)ダウンロードをダウンロード

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件を2026-04-15に公開中

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