3GOL

HCV NS5b polymerase in complex with 1,5 benzodiazepine inhibitor (R)-11d

3GOL の概要

• エントリーDOI: 10.2210/pdb3gol/pdb
• 関連するPDBエントリー: 3CSO 3GNV 3GNW
• 分子名称: RNA-directed RNA polymerase, (11R)-10-acetyl-11-(2,4-dichlorophenyl)-6-hydroxy-3,3-dimethyl-2,3,4,5,10,11-hexahydro-1H-dibenzo[b,e][1,4]diazepin-1-one, MAGNESIUM ION, ... (4 entities in total)
• 機能のキーワード: 1, 5-benzodiazepine, hcv polymerase, ns5b, medicinal chemistry, 1b-j4, transferase
• 由来する生物種: Hepatitis C virus isolate (HCV)
• 細胞内の位置: Core protein p21: Host endoplasmic reticulum membrane ; Single-pass membrane protein . Core protein p19: Virion . Envelope glycoprotein E1: Virion membrane ; Single-pass type I membrane protein . Envelope glycoprotein E2: Virion membrane ; Single-pass type I membrane protein . p7: Host endoplasmic reticulum membrane ; Multi-pass membrane protein . Protease NS2-3: Host endoplasmic reticulum membrane ; Multi-pass membrane protein . Serine protease NS3: Host endoplasmic reticulum membrane ; Peripheral membrane protein . Non-structural protein 4A: Host endoplasmic reticulum membrane ; Single-pass type I membrane protein . Non-structural protein 4B: Host endoplasmic reticulum membrane ; Multi-pass membrane protein . Non-structural protein 5A: Host endoplasmic reticulum membrane ; Peripheral membrane protein . RNA-directed RNA polymerase: Host endoplasmic reticulum membrane ; Single-pass type I membrane protein : O92972
• タンパク質・核酸の鎖数: 2
• 化学式量合計: 130573.81

構造登録者

Nyanguile, O.,De Bondt, H. (登録日: 2009-03-19, 公開日: 2009-06-16, 最終更新日: 2024-03-20)

• 主引用文献: McGowan, D.,Nyanguile, O.,Cummings, M.D.,Vendeville, S.,Vandyck, K.,Van den Broeck, W.,Boutton, C.W.,De Bondt, H.,Quirynen, L.,Amssoms, K.,Bonfanti, J.F.,Last, S.,Rombauts, K.,Tahri, A.,Hu, L.,Delouvroy, F.,Vermeiren, K.,Vandercruyssen, G.,Van der Helm, L.,Cleiren, E.,Mostmans, W.,Lory, P.,Pille, G.,Van Emelen, K.,Fanning, G.,Pauwels, F.,Lin, T.I.,Simmen, K.,Raboisson, P.; 1,5-Benzodiazepine inhibitors of HCV NS5B polymerase.; Bioorg.Med.Chem.Lett., 19:2492-2496, 2009; PubMed: 19342234; DOI: 10.1016/j.bmcl.2009.03.035

実験手法

X-RAY DIFFRACTION (2.85 Å)