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3APS

Crystal structure of Trx4 domain of ERdj5

3APS の概要
エントリーDOI10.2210/pdb3aps/pdb
関連するPDBエントリー3APO 3APQ
分子名称DnaJ homolog subfamily C member 10, SULFATE ION, GLYCEROL, ... (4 entities in total)
機能のキーワードthioredoxin fold, cxxc motif, endoplasmic reticulum, oxidoreductase
由来する生物種Mus musculus (MOUSE)
細胞内の位置Secreted (Potential): Q9DC23
タンパク質・核酸の鎖数2
化学式量合計28074.31
構造登録者
Inaba, K.,Suzuki, M.,Nagata, K. (登録日: 2010-10-20, 公開日: 2011-04-20, 最終更新日: 2024-10-23)
主引用文献Hagiwara, M.,Maegawa, K.,Suzuki, M.,Ushioda, R.,Araki, K.,Matsumoto, Y.,Hoseki, J.,Nagata, K.,Inaba, K.
Structural basis of an ERAD pathway mediated by the ER-resident protein disulfide reductase ERdj5.
Mol.Cell, 41:432-444, 2011
Cited by
PubMed Abstract: ER-associated degradation (ERAD) is an ER quality-control process that eliminates terminally misfolded proteins. ERdj5 was recently discovered to be a key ER-resident PDI family member protein that accelerates ERAD by reducing incorrect disulfide bonds in misfolded glycoproteins recognized by EDEM1. We here solved the crystal structure of full-length ERdj5, thereby revealing that ERdj5 contains the N-terminal J domain and six tandem thioredoxin domains that can be divided into the N- and C-terminal clusters. Our systematic biochemical analyses indicated that two thioredoxin domains that constitute the C-terminal cluster form the highly reducing platform that interacts with EDEM1 and reduces EDEM1-recruited substrates, leading to their facilitated degradation. The pulse-chase experiment further provided direct evidence for the sequential movement of an ERAD substrate from calnexin to the downstream EDEM1-ERdj5 complex, and then to the retrotranslocation channel, probably through BiP. We present a detailed molecular view of how ERdj5 mediates ERAD in concert with EDEM1.
PubMed: 21329881
DOI: 10.1016/j.molcel.2011.01.021
主引用文献が同じPDBエントリー
実験手法
X-RAY DIFFRACTION (1.9 Å)
構造検証レポート
Validation report summary of 3aps
検証レポート(詳細版)ダウンロードをダウンロード

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件を2026-02-25に公開中

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