Crystal structure of SoxR in complex with DNA

Summary for 2ZHG

DescriptorDNA (5'-D(*DGP*DCP*DCP*DTP*DCP*DAP*DAP*DGP*DTP*DTP*DAP*DAP*DCP*DTP*DTP*DGP*DAP*DGP*DGP*DC)-3'), Redox-sensitive transcriptional activator soxR, FE2/S2 (INORGANIC) CLUSTER, ... (6 entities in total)
Functional Keywordsoxidative stress, merr family, activator, dna-binding, iron, iron-sulfur, metal-binding, transcription, transcription regulation, transcription-dna complex, transcription/dna
Biological sourceEscherichia coli
Total number of polymer chains2
Total molecular weight23733.9
Watanabe, S.,Kita, A.,Kobayashi, K.,Miki, K. (deposition date: 2008-02-05, release date: 2008-03-25, Last modification date: 2011-07-13)
Primary citation
Watanabe, S.,Kita, A.,Kobayashi, K.,Miki, K.
Crystal structure of the [2Fe-2S] oxidative-stress sensor SoxR bound to DNA
Proc.Natl.Acad.Sci.Usa, 105:4121-4126, 2008
PubMed: 18334645 (PDB entries with the same primary citation)
DOI: 10.1073/pnas.0709188105
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.291201.7%10.9%2.1%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution