2YON

Solution NMR structure of the C-terminal extension of two bacterial light, oxygen, voltage (LOV) photoreceptor proteins from Pseudomonas putida

2YON の概要

• エントリーDOI: 10.2210/pdb2yon/pdb
• NMR情報: BMRB: 18160
• 分子名称: SENSORY BOX PROTEIN (1 entity in total)
• 機能のキーワード: signaling protein, voltage (lov) domain
• 由来する生物種: PSEUDOMONAS PUTIDA KT2440
• タンパク質・核酸の鎖数: 1
• 化学式量合計: 3411.78

構造登録者

Rani, R.,Hartmann, R.,Lecher, J.,Krauss, U.,Jaeger, K.,Willbold, D. (登録日: 2012-10-25, 公開日: 2013-07-10, 最終更新日: 2024-11-13)

主引用文献

Rani, R.,Jentzsch, K.,Lecher, J.,Hartmann, R.,Willbold, D.,Jaeger, K.,Krauss, U.
Conservation of Dark Recovery Kinetic Parameters and Structural Features in the Pseudomonadaceae "Short" Light, Oxygen, Voltage (Lov) Protein Family: Implications for the Design of Lov-Based Optogenetic Tools.
Biochemistry, 52:4460-, 2013

PubMed Abstract: In bacteria and fungi, various light, oxygen, voltage (LOV) sensory systems that lack a fused effector domain but instead contain only short N- and C-terminal extensions flanking the LOV core exist. In the prokaryotic kingdom, this so-called "short" LOV protein family represents the third largest LOV photoreceptor family. This observation prompted us to study their distribution and phylogeny as well as their photochemical and structural properties in more detail. We recently described the slow and fast reverting "short" LOV proteins PpSB1-LOV and PpSB2-LOV from Pseudomonas putida KT2440 whose adduct state lifetimes varied by 3 orders of magnitude [Jentzsch, K., Wirtz, A., Circolone, F., Drepper, T., Losi, A., Gärtner, W., Jaeger, K. E., and Krauss, U. (2009) Biochemistry 48, 10321-10333]. We now present evidence of the conservation of similar fast and slow-reverting "short" LOV proteins in different Pseudomonas species. Truncation studies conducted with PpSB1-LOV and PpSB2-LOV suggested that the short N- and C-terminal extensions outside of the LOV core domain are essential for the structural integrity and folding of the two proteins. While circular dichroism and solution nuclear magnetic resonance experiments verify that the two short C-terminal extensions of PpSB1-LOV and PpSB2-LOV form independently folding helical structures in solution, bioinformatic analyses imply the formation of coiled coils of the respective structural elements in the context of the dimeric full-length proteins. Given their prototypic architecture, conserved in most more complex LOV photoreceptor systems, "short" LOV proteins could represent ideally suited building blocks for the design of genetically encoded photoswitches (i.e., LOV-based optogenetic tools).

PubMed: 23746326
DOI: 10.1021/BI400311R

実験手法

SOLUTION NMR