2WPQ

Salmonella enterica SadA 479-519 fused to GCN4 adaptors (SadAK3, in- register fusion)

2WPQ の概要

• エントリーDOI: 10.2210/pdb2wpq/pdb
• 関連するPDBエントリー: 2WPR 2WPS 2WPY 2WPZ 2WQ0 2WQ1 2WQ2 2WQ3
• 分子名称: TRIMERIC AUTOTRANSPORTER ADHESIN FRAGMENT, NITRATE ION, CHLORIDE ION, ... (4 entities in total)
• 機能のキーワード: hydrophobic core, ion coordination, protein export, trimeric autotransporter adhesin, taa, membrane protein, polar core residues
• 由来する生物種: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM
• タンパク質・核酸の鎖数: 3
• 化学式量合計: 34790.97

構造登録者

Hartmann, M.D.,Hernandez Alvarez, B.,Albrecht, R.,Zeth, K.,Lupas, A.N. (登録日: 2009-08-09, 公開日: 2009-11-03, 最終更新日: 2023-12-20)

主引用文献

Hartmann, M.D.,Ridderbusch, O.,Zeth, K.,Albrecht, R.,Testa, O.,Woolfson, D.N.,Sauer, G.,Dunin-Horkawicz, S.,Lupas, A.N.,Alvarez, B.H.
A Coiled-Coil Motif that Sequesters Ions to the Hydrophobic Core.
Proc.Natl.Acad.Sci.USA, 106:16950-, 2009

PubMed Abstract: Most core residues of coiled coils are hydrophobic. Occasional polar residues are thought to lower stability, but impart structural specificity. The coiled coils of trimeric autotransporter adhesins (TAAs) are conspicuous for their large number of polar residues in position d of the core, which often leads to their prediction as natively unstructured regions. The most frequent residue, asparagine (N@d), can occur in runs of up to 19 consecutive heptads, frequently in the motif [I/V]xxNTxx. In the Salmonella TAA, SadA, the core asparagines form rings of interacting residues with the following threonines, grouped around a central anion. This conformation is observed generally in N@d layers from trimeric coiled coils of known structure. Attempts to impose a different register on the motif show that the asparagines orient themselves specifically into the core, even against conflicting information from flanking domains. When engineered into the GCN4 leucine zipper, N@d layers progressively destabilized the structure, but zippers with 3 N@d layers still folded at high concentration. We propose that N@d layers maintain the coiled coils of TAAs in a soluble, export-competent state during autotransport through the outer membrane. More generally, we think that polar motifs that are both periodic and conserved may often reflect special folding requirements, rather than an unstructured state of the mature proteins.

PubMed: 19805097
DOI: 10.1073/PNAS.0907256106

実験手法

X-RAY DIFFRACTION (1.85 Å)