Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

2VYW

Hemoglobin (Hb2) from trematode Fasciola hepatica

Summary for 2VYW
Entry DOI10.2210/pdb2vyw/pdb
DescriptorHEMOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, OXYGEN MOLECULE, ... (4 entities in total)
Functional Keywordshemoglobin, trematode, oxygen binding
Biological sourceFASCIOLA HEPATICA
Total number of polymer chains1
Total formula weight17232.53
Authors
Dewilde, S.,Ioanitescu, A.I.,Kiger, L.,Gilany, K.,Marden, M.C.,Van Doorslaer, S.,Vercruysse, J.,Pesce, A.,Nardini, M.,Bolognesi, M.,Moens, L. (deposition date: 2008-07-29, release date: 2008-08-12, Last modification date: 2023-12-13)
Primary citationDewilde, S.,Ioanitescu, A.I.,Kiger, L.,Gilany, K.,Marden, M.C.,Van Doorslaer, S.,Vercruysse, J.,Pesce, A.,Nardini, M.,Bolognesi, M.,Moens, L.
The Hemoglobins of the Trematodes Fasciola Hepatica and Paramphistomum Epiclitum: A Molecular Biological, Physico-Chemical, Kinetic, and Vaccination Study.
Protein Sci., 17:1653-, 2008
Cited by
PubMed Abstract: The trematode Fasciola hepatica (Fa.he.) is a common parasite of human and livestock. The hemoglobin (Hb) of Fa.he., a potential immunogen, was chosen for characterization in the search for an effective vaccine. Characterization of trematode Hbs show that they are intracellular single-domain globins with the following remarkable features: (1) Fa.he. expresses two Hb isoforms that differ at two amino acid sites (F1: 119Y/123Q; F2: 119F/123L). Both isoforms are monoacetylated at their N-termini; (2) the genes coding for Fa.he. and Paramphistomum epiclitum (Pa.ep.) Hbs are interrupted by two introns at the conserved positions B12.2 and G7.0.; (3) UV/VIS and resonance Raman spectroscopy identify the recombinant Fa.he. HbF2 as a pentacoordinated high-spin ferrous Hb; (4) electron paramagnetic resonance spectroscopy of cyano-met Fa.he. HbF2 proves that the endogenously bound imidazole has no imidazolate character; (5) the major structural determinants of the globin fold are present, they contain a TyrB10/TyrE7 residue pair on the distal side. Although such distal-site pair is a signature for high oxygen affinity, as shown for Pa.ep. Hb, the oxygen-binding rate parameters for Fa.he. Hb are intermediate between those of myoglobin and those of other trematode Hbs; (6) the three-dimensional structure of recombinant Fa.he. HbF2 from this study closely resembles the three-dimensional structure of Pa.ep. determined earlier. The set of distal-site polar interactions observed in Pa.ep. Hb is matched with small but significant structural adjustments; (7) despite the potential immunogenic character of the fluke Hb, vaccination of calves with recombinant Fa.he. HbF2 failed to promote protection against parasitic infection.
PubMed: 18621914
DOI: 10.1110/PS.036558.108
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (1.8 Å)
Structure validation

239149

數據於2025-07-23公開中

PDB statisticsPDBj update infoContact PDBjnumon