Complex of YPD1 and SLN1-R1 with bound Mg2+ and BeF3-

Summary for 2R25

Related1QSP 1OXB 1OXK
DescriptorPhosphorelay intermediate protein YPD1, Osmosensing histidine protein kinase SLN1, MAGNESIUM ION, ... (6 entities in total)
Functional Keywordsalpha5-beta5, response regulator, four helix bundle, histidine phosphotransfer (hpt) protein, histidine kinase (hk), cytoplasm, nucleus, phosphorylation, two-component regulatory system, glycoprotein, magnesium, membrane, metal-binding, transferase, transmembrane, signaling protein-transferase complex, signaling protein/transferase
Biological sourceSaccharomyces cerevisiae (baker's yeast)
Cellular locationCytoplasm Q07688
Cell membrane ; Multi-pass membrane protein  P39928
Total number of polymer chains2
Total molecular weight34251.29
Copeland, D.M.,Zhao, X.,Soares, A.S.,West, A.H. (deposition date: 2007-08-24, release date: 2008-01-15, Last modification date: 2017-10-25)
Primary citation
Zhao, X.,Copeland, D.M.,Soares, A.S.,West, A.H.
Crystal structure of a complex between the phosphorelay protein YPD1 and the response regulator domain of SLN1 bound to a phosphoryl analog
J.Mol.Biol., 375:1141-1151, 2008
PubMed: 18076904 (PDB entries with the same primary citation)
DOI: 10.1016/j.jmb.2007.11.045
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.257181.7%7.5%16.4%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution