2O82

Duplex DNA containing an abasic site with an opposite dC (beta anomer) in 5'-G_AC-3' (10 structure ensemble and averaged structure)

Summary for 2O82

• Entry DOI: 10.2210/pdb2o82/pdb
• Related: 2HSL 2HSR 2O7W 2O7X 2O7Y 2O80
• Descriptor: 5'-D(*CP*CP*AP*AP*AP*GP*(AAB)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*CP*CP*TP*TP*TP*GP*G)-3' (2 entities in total)
• Functional Keywords: dna damage, ape1, abasic, amber, molecular dynamics, dna
• Total number of polymer chains: 2
• Total formula weight: 7812.06

Authors

Chen, J.,Dupradeau, F.Y.,Case, D.A.,Turner, C.J.,Stubbe, J. (deposition date: 2006-12-11, release date: 2007-11-27, Last modification date: 2023-11-29)

• Primary citation: Chen, J.,Dupradeau, F.Y.,Case, D.A.,Turner, C.J.,Stubbe, J.; DNA oligonucleotides with A, T, G or C opposite an abasic site: structure and dynamics.; Nucleic Acids Res., 36:253-262, 2008; PubMed: 18025040; DOI: 10.1093/nar/gkm622

Experimental method

SOLUTION NMR