2NNP

Crystal structure analysis of HIV-1 protease mutant I84V with a inhibitor saquinavir

Summary for 2NNP

Related2NMW 2NMY 2NMZ 2NNK
Related PRD IDPRD_000454
DescriptorPROTEASE, (2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1-phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide, ACETIC ACID, ... (6 entities in total)
Functional Keywordshiv-1 protease, mutant, i84v, dimer, hydrolase-hydrolase inhibitor complex, hydrolase/hydrolase inhibitor
Biological sourceHuman immunodeficiency virus 1
Cellular locationGag-Pol polyprotein: Host cell membrane; Lipid-anchor. Matrix protein p17: Virion membrane; Lipid- anchor . Capsid protein p24: Virion . Nucleocapsid protein p7: Virion . Reverse transcriptase/ribonuclease H: Virion . Integrase: Virion  P04587
Total number of polymer chains2
Total molecular weight22524.5
Authors
Tie, Y.,Kovalevsky, A.Y.,Boross, P.,Wang, Y.F.,Ghosh, A.K.,Tozser, J.,Harrison, R.W.,Weber, I.T. (deposition date: 2006-10-24, release date: 2007-03-13, Last modification date: 2017-10-18)
Primary citation
Tie, Y.,Kovalevsky, A.Y.,Boross, P.,Wang, Y.F.,Ghosh, A.K.,Tozser, J.,Harrison, R.W.,Weber, I.T.
Atomic resolution crystal structures of HIV-1 protease and mutants V82A and I84V with saquinavir.
Proteins, 67:232-242, 2007
PubMed: 17243183 (PDB entries with the same primary citation)
DOI: 10.1002/prot.21304
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.2 Å)
NMR Information
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.195602.5%0.5%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 2nnp
no rotation
Molmil generated image of 2nnp
rotated about x axis by 90°
Molmil generated image of 2nnp
rotated about y axis by 90°