2MOF

Structural insights of TM domain of LAMP-2A in DPC micelles

2MOF の概要

• エントリーDOI: 10.2210/pdb2mof/pdb
• 関連するPDBエントリー: 2MOM
• NMR情報: BMRB: 19941
• 分子名称: Lysosome-associated membrane glycoprotein 2 (1 entity in total)
• 機能のキーワード: membrane protein
• 由来する生物種: Homo sapiens (human)
• 細胞内の位置: Cell membrane ; Single-pass type I membrane protein : P13473
• タンパク質・核酸の鎖数: 1
• 化学式量合計: 4484.16

構造登録者

Tjandra, N.,Rout, A. (登録日: 2014-04-25, 公開日: 2014-10-29, 最終更新日: 2024-05-01)

主引用文献

Rout, A.K.,Strub, M.P.,Piszczek, G.,Tjandra, N.
Structure of Transmembrane Domain of Lysosome-associated Membrane Protein Type 2a (LAMP-2A) Reveals Key Features for Substrate Specificity in Chaperone-mediated Autophagy.
J.Biol.Chem., 289:35111-35123, 2014

PubMed Abstract: Chaperone-mediated autophagy (CMA) is a highly regulated cellular process that mediates the degradation of a selective subset of cytosolic proteins in lysosomes. Increasing CMA activity is one way for a cell to respond to stress, and it leads to enhanced turnover of non-critical cytosolic proteins into sources of energy or clearance of unwanted or damaged proteins from the cytosol. The lysosome-associated membrane protein type 2a (LAMP-2A) together with a complex of chaperones and co-chaperones are key regulators of CMA. LAMP-2A is a transmembrane protein component for protein translocation to the lysosome. Here we present a study of the structure and dynamics of the transmembrane domain of human LAMP-2A in n-dodecylphosphocholine micelles by nuclear magnetic resonance (NMR). We showed that LAMP-2A exists as a homotrimer in which the membrane-spanning helices wrap around each other to form a parallel coiled coil conformation, whereas its cytosolic tail is flexible and exposed to the cytosol. This cytosolic tail of LAMP-2A interacts with chaperone Hsc70 and a CMA substrate RNase A with comparable affinity but not with Hsp40 and RNase S peptide. Because the substrates and the chaperone complex can bind at the same time, thus creating a bimodal interaction, we propose that substrate recognition by chaperones and targeting to the lysosomal membrane by LAMP-2A are coupled. This can increase substrate affinity and specificity as well as prevent substrate aggregation, assist in the unfolding of the substrate, and promote the formation of the higher order complex of LAMP-2A required for translocation.

PubMed: 25342746
DOI: 10.1074/jbc.M114.609446

実験手法

SOLUTION NMR