2L50

Solution structure of apo S100A16

「2L0U」から置き換えられました

2L50 の概要

• エントリーDOI: 10.2210/pdb2l50/pdb
• 関連するPDBエントリー: 2l51
• NMR情報: BMRB: 17261
• 分子名称: Protein S100-A16 (1 entity in total)
• 機能のキーワード: metal binding protein, apos100a16, ef-hand protein, s100 protein
• 由来する生物種: Homo sapiens (human)
• タンパク質・核酸の鎖数: 2
• 化学式量合計: 23372.38

構造登録者

Babini, E.,Bertini, I.,Borsi, V.,Calderone, V.,Hu, X.,Luchinat, C.,Parigi, G. (登録日: 2010-10-22, 公開日: 2010-11-03, 最終更新日: 2024-05-15)

主引用文献

Babini, E.,Bertini, I.,Borsi, V.,Calderone, V.,Hu, X.,Luchinat, C.,Parigi, G.
Structural characterization of human S100A16, a low-affinity calcium binder.
J.Biol.Inorg.Chem., 16:243-256, 2011

PubMed Abstract: The homodimeric structure of human S100A16 in the apo state has been obtained both in the solid state and in solution, resulting in good agreement between the structures with the exception of two loop regions. The homodimeric solution structure of human S100A16 was also calculated in the calcium(II)-bound form. Differently from most S100 proteins, the conformational rearrangement upon calcium binding is minor. This characteristic is likely to be related to the weak binding affinity of the protein for the calcium(II) ions. In turn, this is ascribed to the lack of the glutamate residue at the end of the S100-specific N-domain binding site, which in most S100 proteins provides two important side chain oxygen atoms as calcium(II) ligands. Furthermore, the presence of hydrophobic interactions stronger than for other S100 proteins, present in the closed form of S100A16 between the third and fourth helices, likely make the closed structure of the second EF-hand particularly stable, so even upon calcium(II) binding such a conformation is not disrupted.

PubMed: 21046186
DOI: 10.1007/s00775-010-0721-3

実験手法

SOLUTION NMR