2HSK

NMR Structure of 13mer Duplex DNA containing an abasic site (Y) in 5'-CCAAAGYACCGGG-3' (10 structures, alpha anomer)

Summary for 2HSK

Related2HOU 2HPX 2HSS 2HSL 2HSR
Descriptor5'-D(*CP*CP*AP*AP*AP*GP*(D1P)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3' (2 entities in total)
Functional Keywordsabasic site, dna lesion, base excision repair, ape1, dna
Biological sourcesynthetic construct
Total number of polymer chains2
Total molecular weight7836.09
Authors
Chen, J.,Dupradeau, F.Y.,Case, D.A.,Turner, C.J.,Stubbe, J. (deposition date: 2006-07-21, release date: 2007-05-29, Last modification date: 2018-08-08)
Primary citation
Chen, J.,Dupradeau, F.Y.,Case, D.A.,Turner, C.J.,Stubbe, J.
Nuclear magnetic resonance structural studies and molecular modeling of duplex DNA containing normal and 4'-oxidized abasic sites.
Biochemistry, 46:3096-3107, 2007
PubMed: 17323932 (PDB entries with the same primary citation)
DOI: 10.1021/bi6024269
MImport into Mendeley
Experimental method
SOLUTION NMR
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Structure validation

Clashscore0MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all NMR structures