Structure ensembles of duplex DNA containing a 4'-oxidized abasic site.

Summary for 2HOU

Descriptor5'-D(*CP*CP*AP*AP*AP*GP*(X4A)P*AP*CP*CP*GP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3' (2 entities in total)
Functional Keywordsabasic site, dna lesion, ber, bleomycin, dna
Biological sourcesynthetic construct
Total number of polymer chains2
Total molecular weight7852.09
Chen, J.,Dupradeau, F.Y.,Case, D.A.,Turner, C.J.,Stubbe, J. (deposition date: 2006-07-16, release date: 2007-05-29, Last modification date: 2018-08-08)
Primary citation
Chen, J.,Dupradeau, F.Y.,Case, D.A.,Turner, C.J.,Stubbe, J.
Nuclear magnetic resonance structural studies and molecular modeling of duplex DNA containing normal and 4'-oxidized abasic sites.
Biochemistry, 46:3096-3107, 2007
PubMed: 17323932 (PDB entries with the same primary citation)
DOI: 10.1021/bi6024269
MImport into Mendeley
Experimental method

Structure validation

Clashscore0MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all NMR structures
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