2FIO

Phage phi29 transcription regulator p4-DNA complex

2FIO の概要

• エントリーDOI: 10.2210/pdb2fio/pdb
• 分子名称: DNA (41-MER), Late genes activator, ... (4 entities in total)
• 機能のキーワード: protein-dna complex; n-hook dna-binding motif; transcription regulation, transcription-dna complex, transcription/dna
• 由来する生物種: Bacillus phage phi29
• タンパク質・核酸の鎖数: 4
• 化学式量合計: 55090.54

構造登録者

Badia, D.,Camacho, A.,Perez-Lago, L.,Escandon, C.,Salas, M.,Coll, M. (登録日: 2005-12-30, 公開日: 2006-09-26, 最終更新日: 2024-02-14)

主引用文献

Badia, D.,Camacho, A.,Perez-Lago, L.,Escandon, C.,Salas, M.,Coll, M.
The structure of phage phi29 transcription regulator p4-DNA complex reveals an N-hook motif for DNA
Mol.Cell, 22:73-81, 2006

PubMed Abstract: Protein p4 affects the transcriptional switch that divides bacteriophage phi29 infection in early and late phases. The synthesis of DNA replication proteins and p4 takes place in the early phase, while structural, morphogenesis, and lysis proteins are synthesized in the late phase. Transcriptional switch by p4 is achieved by activating the late promoter A3 and repressing the early promoters A2b and A2c. The crystal structure of p4 alone and in complex with a 41 bp DNA, including the A3 promoter binding site, helps us to understand how the phage cycle is controlled. Protein p4 has a unique alpha/beta fold that includes a DNA recognition motif consisting of two N-terminal beta turn substructures, or N-hooks, located at the tips of an elongated protein homodimer. The two N-hooks enter the major groove of the double helix, establishing base-specific contacts. A high DNA curvature allows p4 N-hooks to reach two major groove areas three helical turns apart, like a bow and its string.

PubMed: 16600871
DOI: 10.1016/j.molcel.2006.02.019

実験手法

X-RAY DIFFRACTION (2.7 Å)