2EZZ

SOLUTION STRUCTURE OF HUMAN BARRIER-TO-AUTOINTEGRATION FACTOR BAF NMR, ENSEMBLE OF 20 SIMULATED ANNEALING STRUCTURES

2EZZ の概要

• エントリーDOI: 10.2210/pdb2ezz/pdb
• 分子名称: BARRIER-TO-AUTOINTEGRATION FACTOR (1 entity in total)
• 機能のキーワード: dna-binding protein, integration, aids, retroviruses, dna binding protein
• 由来する生物種: Homo sapiens (human)
• 細胞内の位置: Nucleus: O75531
• タンパク質・核酸の鎖数: 2
• 化学式量合計: 20147.18

構造登録者

Clore, G.M.,Cai, M.,Gronenborn, A.M. (登録日: 1998-07-26, 公開日: 1999-01-13, 最終更新日: 2024-05-29)

主引用文献

Cai, M.,Huang, Y.,Zheng, R.,Wei, S.Q.,Ghirlando, R.,Lee, M.S.,Craigie, R.,Gronenborn, A.M.,Clore, G.M.
Solution structure of the cellular factor BAF responsible for protecting retroviral DNA from autointegration.
Nat.Struct.Biol., 5:903-909, 1998

PubMed Abstract: The solution structure of the human barrier-to-autointegration factor, BAF, a 21,000 Mr dimer, has been solved by NMR, including extensive use of dipolar couplings which provide a priori long range structural information. BAF is a highly evolutionarily conserved DNA binding protein that is responsible for inhibiting autointegration of retroviral DNA, thereby promoting integration of retroviral DNA into the host chromosome. BAF is largely helical, and each subunit is composed of five helices. The dimer is elongated in shape and the dimer interface comprises principally hydrophobic contacts supplemented by a single salt bridge. Despite the absence of any sequence similarity to any other known protein family, the topology of helices 3-5 is similar to that of a number of DNA binding proteins, with helices 4 and 5 constituting a helix-turn-helix motif. A model for the interaction of BAF with DNA that is consistent with structural and mutagenesis data is proposed.

PubMed: 9783751
DOI: 10.1038/2345

実験手法

SOLUTION NMR