2DT5

Crystal Structure of TTHA1657 (AT-rich DNA-binding protein) from Thermus thermophilus HB8

Summary for 2DT5

DescriptorAT-rich DNA-binding protein, SULFATE ION, CHLORIDE ION, ... (6 entities in total)
Functional Keywordsrex, nadh, nad, rossmann fold, redox sensing, winged helix, thermus themophilus, riken structural genomics/proteomics initiative, rsgi, structural genomics, dna binding protein
Biological sourceThermus thermophilus
Cellular locationCytoplasm (Probable) Q5SHS3
Total number of polymer chains2
Total molecular weight48388.76
Authors
Nakamura, A.,Sosa, A.,Komori, H.,Kita, A.,Miki, K.,RIKEN Structural Genomics/Proteomics Initiative (RSGI) (deposition date: 2006-07-11, release date: 2007-01-02, Last modification date: 2011-07-13)
Primary citation
Nakamura, A.,Sosa, A.,Komori, H.,Kita, A.,Miki, K.
Crystal structure of TTHA1657 (AT-rich DNA-binding protein; p25) from Thermus thermophilus HB8 at 2.16 A resolution
Proteins, 66:755-759, 2007
PubMed: 17154156 (PDB entries with the same primary citation)
DOI: 10.1002/prot.21222
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.16 Å)
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Structure validation

ClashscoreRamachandran outliersSidechain outliers1003.6%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 2dt5
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Molmil generated image of 2dt5
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Molmil generated image of 2dt5
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More Biological unit images

Molmil generated image of 2dt5
no rotation
Molmil generated image of 2dt5
rotated about x axis by 90°
Molmil generated image of 2dt5
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (2dt5.pdb2.gz [147.84 KB])
Coordinate files for Biological unit (2dt5.pdb1.gz [75.28 KB])