2D1E

Crystal structure of PcyA-biliverdin complex

Summary for 2D1E

DescriptorPhycocyanobilin:ferredoxin oxidoreductase, SODIUM ION, BILIVERDINE IX ALPHA, ... (4 entities in total)
Functional Keywordsalpha-beta-alpha sandwich, enzyme-substrate complex, oxidoreductase
Biological sourceSynechocystis sp.
Total number of polymer chains1
Total molecular weight28761.79
Authors
Hagiwara, Y.,Sugishima, M.,Takahashi, Y.,Fukuyama, K. (deposition date: 2005-08-17, release date: 2006-01-24, Last modification date: 2017-10-11)
Primary citation
Hagiwara, Y.,Sugishima, M.,Takahashi, Y.,Fukuyama, K.
Crystal structure of phycocyanobilin:ferredoxin oxidoreductase in complex with biliverdin IXalpha, a key enzyme in the biosynthesis of phycocyanobilin
Proc.Natl.Acad.Sci.Usa, 103:27-32, 2006
PubMed: 16380422 (PDB entries with the same primary citation)
DOI: 10.1073/pnas.0507266103
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.51 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.1621102.4%2.5%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution