1ZPL

E. coli F17a-G lectin domain complex with GlcNAc(beta1-O)Me

1ZPL の概要

• エントリーDOI: 10.2210/pdb1zpl/pdb
• 関連するPDBエントリー: 1O9V
• 分子名称: F17a-G, methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside (3 entities in total)
• 機能のキーワード: fimbriae, lectins, bacterial adhesion, protein-sugar complex, cell adhesion
• 由来する生物種: Escherichia coli
• 細胞内の位置: Fimbrium: Q99003
• タンパク質・核酸の鎖数: 2
• 化学式量合計: 38566.92

構造登録者

Buts, L.,Wellens, A.,Van Molle, I.,Wyns, L.,Loris, R.,Lahmann, M.,Oscarson, S.,De Greve, H.,Bouckaert, J. (登録日: 2005-05-17, 公開日: 2006-05-23, 最終更新日: 2024-10-30)

主引用文献

Buts, L.,Wellens, A.,Van Molle, I.,Wyns, L.,Loris, R.,Lahmann, M.,Oscarson, S.,De Greve, H.,Bouckaert, J.
Impact of natural variation in bacterial F17G adhesins on crystallization behaviour.
Acta Crystallogr.,Sect.D, 61:1149-1159, 2005

PubMed Abstract: Since the introduction of structural genomics, the protein has been recognized as the most important variable in crystallization. Recent strategies to modify a protein to improve crystal quality have included rationally engineered point mutations, truncations, deletions and fusions. Five naturally occurring variants, differing in 1-18 amino acids, of the 177-residue lectin domain of the F17G fimbrial adhesin were expressed and purified in identical ways. For four out of the five variants crystals were obtained, mostly in non-isomorphous space groups, with diffraction limits ranging between 2.4 and 1.1 A resolution. A comparative analysis of the crystal-packing contacts revealed that the variable amino acids are often involved in lattice contacts and a single amino-acid substitution can suffice to radically change crystal packing. A statistical approach proved reliable to estimate the compatibilities of the variant sequences with the observed crystal forms. In conclusion, natural variation, universally present within prokaryotic species, is a valuable genetic resource that can be favourably employed to enhance the crystallization success rate with considerably less effort than other strategies.

PubMed: 16041081
DOI: 10.1107/S0907444905017038

実験手法

X-RAY DIFFRACTION (1.7 Å)