1YIY

Aedes aegypti kynurenine aminotransferase

Summary for 1YIY

• Entry DOI: 10.2210/pdb1yiy/pdb
• Related: 1YIZ
• Descriptor: kynurenine aminotransferase; glutamine transaminase K, BROMIDE ION, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, ... (4 entities in total)
• Functional Keywords: kynurenine, kynurenic acid, kynurenine aminotrasferase, aedes, mosquito, plp-enzyme, pmp, pyridoxamine phosphate, transferase
• Biological source: Aedes aegypti (yellow fever mosquito)
• Total number of polymer chains: 2
• Total formula weight: 97568.14

Authors

Han, Q.,Gao, Y.G.,Robinson, H.,Ding, H.,Wilson, S.,Li, J. (deposition date: 2005-01-13, release date: 2005-05-10, Last modification date: 2023-08-23)

Primary citation

Han, Q.,Gao, Y.G.,Robinson, H.,Ding, H.,Wilson, S.,Li, J.
Crystal structures of Aedes aegypti kynurenine aminotransferase.
FEBS J., 272:2198-2206, 2005

PubMed Abstract: Aedes aegypti kynurenine aminotransferase (AeKAT) catalyzes the irreversible transamination of kynurenine to kynurenic acid, the natural antagonist of NMDA and 7-nicotinic acetycholine receptors. Here, we report the crystal structure of AeKAT in its PMP and PLP forms at 1.90 and 1.55 A, respectively. The structure was solved by a combination of single-wavelength anomalous dispersion and molecular replacement approaches. The initial search model in the molecular replacement method was built with the result of single-wavelength anomalous dispersion data from the Br-AeKAT crystal in combination with homology modeling. The solved structure shows that the enzyme is a homodimer, and that the two subunits are stabilized by a number of hydrogen bonds, salts bridges, and hydrophobic interactions. Each subunit is divided into an N-terminal arm and small and large domains. Based on its folding, the enzyme belongs to the prototypical fold type, aminotransferase subgroup I. The three-dimensional structure shows a strictly conserved 'PLP-phosphate binding cup' featuring PLP-dependent enzymes. The interaction between Cys284 (A) and Cys284 (B) is unique in AeKAT, which might explain the cysteine effect of AeKAT activity. Further mutation experiments of this residue are needed to eventually understand the mechanism of the enzyme modulation by cysteine.

PubMed: 15853804
DOI: 10.1111/j.1742-4658.2005.04643.x

Experimental method

X-RAY DIFFRACTION (1.9 Å)