1R08

STRUCTURAL ANALYSIS OF ANTIVIRAL AGENTS THAT INTERACT WITH THE CAPSID OF HUMAN RHINOVIRUSES

Summary for 1R08

Related1R09 2R04 2R06 2R07 2RM2 2RR1 2RS1 2RS3 2RS5
DescriptorHUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP1), HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP2), HUMAN RHINOVIRUS 14 COAT PROTEIN (SUBUNIT VP3), ... (5 entities in total)
Functional Keywordsrhinovirus coat protein, icosahedral virus, virus
Biological sourceHuman rhinovirus 14
Cellular locationProtein VP2: Virion. Protein VP3: Virion. Protein VP1: Virion. Protein 2B: Host cytoplasmic vesicle membrane; Peripheral membrane protein; Cytoplasmic side (Potential). Protein 2C: Host cytoplasmic vesicle membrane; Peripheral membrane protein; Cytoplasmic side (Potential). Protein 3A: Host cytoplasmic vesicle membrane; Peripheral membrane protein; Cytoplasmic side (Potential). Protein 3B: Virion (Potential). Picornain 3C: Host cytoplasm (Potential). RNA-directed RNA polymerase 3D-POL: Host cytoplasmic vesicle membrane; Peripheral membrane protein; Cytoplasmic side (Potential) P03303 P03303 P03303 P03303
Total number of polymer chains4
Total molecular weight94955.87
Authors
Badger, J.,Smith, T.J.,Rossmann, M.G. (deposition date: 1988-10-03, release date: 1990-01-15, Last modification date: 2011-07-13)
Primary citation
Badger, J.,Minor, I.,Oliveira, M.A.,Smith, T.J.,Rossmann, M.G.
Structural analysis of antiviral agents that interact with the capsid of human rhinoviruses.
Proteins, 6:1-19, 1989
PubMed: 2558377 (PDB entries with the same primary citation)
DOI: 10.1002/prot.340060102
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (3 Å)
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Structure validation

ClashscoreRamachandran outliersSidechain outliers31 1.1% 20.5%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
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171588
数据于2020-11-25公开中