1C10

CRYSTAL STRUCTURE OF HEW LYSOZYME UNDER PRESSURE OF XENON (8 BAR)

1C10 の概要

• エントリーDOI: 10.2210/pdb1c10/pdb
• 関連するPDBエントリー: 1LSE
• 分子名称: PROTEIN (LYSOZYME), SODIUM ION, CHLORIDE ION, ... (5 entities in total)
• 機能のキーワード: hydrophobic cavity, xenon complex, hydrolase
• 由来する生物種: Gallus gallus (chicken)
• 細胞内の位置: Secreted: P00698
• タンパク質・核酸の鎖数: 1
• 化学式量合計: 14960.75

構造登録者

Prange, T.,Schiltz, M.,Pernot, L.,Colloc'h, N.,Longhi, S.,Bourguet, W.,Fourme, R. (登録日: 1999-07-16, 公開日: 1999-07-22, 最終更新日: 2024-11-20)

主引用文献

Prange, T.,Schiltz, M.,Pernot, L.,Colloc'h, N.,Longhi, S.,Bourguet, W.,Fourme, R.
Exploring hydrophobic sites in proteins with xenon or krypton.
Proteins, 30:61-73, 1998

PubMed Abstract: X-ray diffraction is used to study the binding of xenon and krypton to a variety of crystallised proteins: porcine pancreatic elastase; subtilisin Carlsberg from Bacillus licheniformis; cutinase from Fusarium solani; collagenase from Hypoderma lineatum; hen egg lysozyme, the lipoamide dehydrogenase domain from the outer membrane protein P64k from Neisseria meningitidis; urate-oxidase from Aspergillus flavus, mosquitocidal delta-endotoxin CytB from Bacillus thuringiensis and the ligand-binding domain of the human nuclear retinoid-X receptor RXR-alpha. Under gas pressures ranging from 8 to 20 bar, xenon is able to bind to discrete sites in hydrophobic cavities, ligand and substrate binding pockets, and into the pore of channel-like structures. These xenon complexes can be used to map hydrophobic sites in proteins, or as heavy-atom derivatives in the isomorphous replacement method of structure determination.

PubMed: 9443341
DOI: 10.1002/(SICI)1097-0134(19980101)30:1<61::AID-PROT6>3.3.CO;2-O

実験手法

X-RAY DIFFRACTION (2.03 Å)