6R8Z
Cryo-EM structure of NCP_THF2(-1)-UV-DDB
エンティティ
Entity ID | 鎖名 | 説明 | 種類 | 鎖長 | 化学式量 | 分子数 | データベース名(アクセス番号) | 由来する生物種 | エンティティの一般名 |
1 | A, E | Histone H3.1 | polymer | 139 | 15719.4 | 2 | UniProt (P68431) Pfam (PF00125) In PDB | Homo sapiens (Human) | Histone H3/a,Histone H3/b,Histone H3/c,Histone H3/d,Histone H3/f,Histone H3/h,Histone H3/i,Histone H3/j,Histone H3/k,Histone H3/l |
2 | B, F | Histone H4 | polymer | 106 | 11676.7 | 2 | UniProt (P62805) Pfam (PF15511) In PDB | Homo sapiens (Human) | |
3 | C, G | Histone H2A type 1-B/E | polymer | 133 | 14447.8 | 2 | UniProt (P04908) Pfam (PF00125) Pfam (PF16211) In PDB | Homo sapiens (Human) | Histone H2A.2,Histone H2A/a,Histone H2A/m |
4 | D, H | Histone H2B type 1-J | polymer | 129 | 14217.5 | 2 | UniProt (P06899) Pfam (PF00125) In PDB | Homo sapiens (Human) | Histone H2B.1,Histone H2B.r,H2B/r |
5 | I | Human alpha-satellite DNA (145-MER) | polymer | 145 | 44756.6 | 1 | Homo sapiens | ||
6 | J | Human alpha-satellite DNA (145-MER) with abasic sites at positions 97-98 | polymer | 145 | 44461.4 | 1 | Homo sapiens | ||
7 | K | DNA damage-binding protein 1 | polymer | 1163 | 129766.3 | 1 | UniProt (Q16531) Pfam (PF10433) Pfam (PF03178) In PDB | Homo sapiens (Human) | DDB p127 subunit,DNA damage-binding protein a,DDBa,Damage-specific DNA-binding protein 1,HBV X-associated protein 1,XAP-1,UV-damaged DNA-binding factor,UV-damaged DNA-binding protein 1,UV-DDB 1,XPE-binding factor,XPE-BF,Xeroderma pigmentosum group E-complementing protein,XPCe |
8 | L | DNA damage-binding protein 2 | polymer | 431 | 48261.3 | 1 | UniProt (Q92466) Pfam (PF00400) In PDB | Homo sapiens (Human) | DDB p48 subunit,DDBb,Damage-specific DNA-binding protein 2,UV-damaged DNA-binding protein 2,UV-DDB 2 |
配列変更
A, E: 1 - 136 (UniProt: P68431)
B, F: 1 - 103 (UniProt: P62805)
C, G: 1 - 130 (UniProt: P04908)
D, H: 1 - 126 (UniProt: P06899)
K: 1 - 1140 (UniProt: Q16531)
L: 1 - 427 (UniProt: Q92466)
PDB | 外部データベース | 詳細 |
---|---|---|
Gly -2 | - | expression tag |
Ser -1 | - | expression tag |
His 0 | - | expression tag |
PDB | 外部データベース | 詳細 |
---|---|---|
Gly -2 | - | expression tag |
Ser -1 | - | expression tag |
His 0 | - | expression tag |
PDB | 外部データベース | 詳細 |
---|---|---|
Gly -2 | - | expression tag |
Ser -1 | - | expression tag |
His 0 | - | expression tag |
PDB | 外部データベース | 詳細 |
---|---|---|
Gly -2 | - | expression tag |
Ser -1 | - | expression tag |
His 0 | - | expression tag |
PDB | 外部データベース | 詳細 |
---|---|---|
Met -22 | - | initiating methionine |
Ala -21 | - | expression tag |
Ser -20 | - | expression tag |
Trp -19 | - | expression tag |
Ser -18 | - | expression tag |
His -17 | - | expression tag |
Pro -16 | - | expression tag |
Gln -15 | - | expression tag |
Phe -14 | - | expression tag |
Glu -13 | - | expression tag |
Lys -12 | - | expression tag |
Val -11 | - | expression tag |
Asp -10 | - | expression tag |
Glu -9 | - | expression tag |
Asn -8 | - | expression tag |
Leu -7 | - | expression tag |
Tyr -6 | - | expression tag |
Phe -5 | - | expression tag |
Gln -4 | - | expression tag |
Gly -3 | - | expression tag |
Gly -2 | - | expression tag |
Gly -1 | - | expression tag |
Arg 0 | - | expression tag |
PDB | 外部データベース | 詳細 |
---|---|---|
Gly -3 | - | expression tag |
Gly -2 | - | expression tag |
Gly -1 | - | expression tag |
Arg 0 | - | expression tag |
配列ビューア
非対称単位の内容
タンパク質・ 核酸鎖 | 鎖の数 | 12 |
化学式量合計 | 379368.7 | |
全て* | 化学式量合計 | 379368.7 |