PDB: 9 件ウェブページステータス検索Chemie searchBIRD

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1J1V	Crystal structure of DnaA domainIV complexed with DnaAbox DNA 分子名称: 5'-D(*CP*CP*TP*GP*TP*GP*GP*AP*TP*AP*AP*CP*A)-3', 5'-D(*TP*GP*TP*TP*AP*TP*CP*CP*AP*CP*AP*GP*G)-3', Chromosomal replication initiator protein dnaA 著者 Fujikawa, N, Kurumizaka, H, Nureki, O, Terada, T, Shirouzu, M, Katayama, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2002-12-18 公開日 2003-04-22 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural basis of replication origin recognition by the DnaA protein NUCLEIC ACIDS RES., 31, 2003
3PVP	Structure of Mycobacterium tuberculosis DnaA-DBD in complex with box2 DNA 分子名称: Chromosomal replication initiator protein dnaA, DNA (5'-D(*CP*GP*TP*TP*AP*TP*CP*CP*AP*CP*AP*AP*C)-3'), DNA (5'-D(*GP*TP*TP*GP*TP*GP*GP*AP*TP*AP*AP*CP*G)-3') 著者 Tsodikov, O.V, Biswas, T. 登録日 2010-12-07 公開日 2011-05-25 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural and Thermodynamic Signatures of DNA Recognition by Mycobacterium tuberculosis DnaA. J.Mol.Biol., 410, 2011
3PVV	Structure of Mycobacterium tuberculosis DnaA-DBD in complex with box1 DNA 分子名称: Chromosomal replication initiator protein dnaA, DNA (5'-D(*CP*GP*TP*TP*GP*TP*CP*CP*AP*CP*AP*AP*C)-3'), DNA (5'-D(*GP*TP*TP*GP*TP*GP*GP*AP*CP*AP*AP*CP*G)-3') 著者 Tsodikov, O.V, Biswas, T. 登録日 2010-12-07 公開日 2011-05-25 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural and Thermodynamic Signatures of DNA Recognition by Mycobacterium tuberculosis DnaA. J.Mol.Biol., 410, 2011
8BTG	Cryo-EM structure of the bacterial replication origin opening basal unwinding system 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Chromosomal replication initiator protein DnaA, DNA (41-MER), ... 著者 Pelliciari, S, Bodet-Lefevre, S, Murray, H, Ilangovan, A. 登録日 2022-11-28 公開日 2024-02-14 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 The bacterial replication origin BUS promotes nucleobase capture. Nat Commun, 14, 2023
2HCB	Structure of AMPPCP-bound DnaA from Aquifex aeolicus 分子名称: Chromosomal replication initiator protein dnaA, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER 著者 Erzberger, J.P, Mott, M.L, Berger, J.M. 登録日 2006-06-15 公開日 2006-07-25 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (3.51 Å) 主引用文献 Structural basis for ATP-dependent DnaA assembly and replication-origin remodeling. Nat.Struct.Mol.Biol., 13, 2006
2Z4R	Crystal structure of domain III from the Thermotoga maritima replication initiation protein DnaA 分子名称: ADENOSINE-5'-DIPHOSPHATE, Chromosomal replication initiator protein dnaA, MAGNESIUM ION 著者 Fujikawa, N, Ozaki, S, Kagawa, W, Park, S.-Y, Katayama, T, Kurumizaka, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-06-25 公開日 2008-02-19 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.05 Å) 主引用文献 A Common Mechanism for the ATP-DnaA-dependent Formation of Open Complexes at the Replication Origin J.Biol.Chem., 283, 2008
2Z4S	Crystal structure of domain III from the Thermotoga maritima replication initiation protein DnaA 分子名称: ADENOSINE-5'-DIPHOSPHATE, Chromosomal replication initiator protein dnaA, MAGNESIUM ION 著者 Fujikawa, N, Ozaki, S, Kagawa, W, Park, S.-Y, Katayama, T, Kurumizaka, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-06-25 公開日 2008-02-19 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 A Common Mechanism for the ATP-DnaA-dependent Formation of Open Complexes at the Replication Origin J.Biol.Chem., 283, 2008
1L8Q	CRYSTAL STRUCTURE OF DNA REPLICATION INITIATION FACTOR 分子名称: ADENOSINE-5'-DIPHOSPHATE, Chromosomal replication initiator protein dnaA, MAGNESIUM ION 著者 Erzberger, J.P, Pirruccello, M.M, Berger, J.M. 登録日 2002-03-21 公開日 2002-09-25 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 The structure of bacterial DnaA: implications for general mechanisms underlying DNA replication initiation Embo J., 21, 2002
3R8F	Replication initiator DnaA bound to AMPPCP and single-stranded DNA 分子名称: 5'-D(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3', Chromosomal replication initiator protein dnaA, MAGNESIUM ION, ... 著者 Duderstadt, K.E, Chuang, K, Berger, J.M. 登録日 2011-03-23 公開日 2011-09-28 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.366 Å) 主引用文献 DNA stretching by bacterial initiators promotes replication origin opening. Nature, 478, 2011