6NKJ
1.3 Angstrom Resolution Crystal Structure of UDP-N-acetylglucosamine 1-carboxyvinyltransferase from Streptococcus pneumoniae in Complex with (2R)-2-(phosphonooxy)propanoic acid.
GO(遺伝子オントロジー)由来の情報
鎖名 | GO(遺伝子オントロジー)id | 名前空間 | 内容 |
A | 0003824 | molecular_function | catalytic activity |
A | 0005737 | cellular_component | cytoplasm |
A | 0008360 | biological_process | regulation of cell shape |
A | 0008760 | molecular_function | UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity |
A | 0009252 | biological_process | peptidoglycan biosynthetic process |
A | 0016740 | molecular_function | transferase activity |
A | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
A | 0019277 | biological_process | UDP-N-acetylgalactosamine biosynthetic process |
A | 0051301 | biological_process | cell division |
A | 0071555 | biological_process | cell wall organization |
B | 0003824 | molecular_function | catalytic activity |
B | 0005737 | cellular_component | cytoplasm |
B | 0008360 | biological_process | regulation of cell shape |
B | 0008760 | molecular_function | UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity |
B | 0009252 | biological_process | peptidoglycan biosynthetic process |
B | 0016740 | molecular_function | transferase activity |
B | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
B | 0019277 | biological_process | UDP-N-acetylgalactosamine biosynthetic process |
B | 0051301 | biological_process | cell division |
B | 0071555 | biological_process | cell wall organization |
PDBデータベースに由来する情報
site_id | AC1 |
残基数 | 9 |
詳細 | binding site for residue 0V5 A 501 |
鎖名 | 残基 |
A | ARG96 |
A | CYS120 |
A | THR121 |
A | ARG401 |
A | CIT502 |
A | HOH609 |
A | HOH642 |
A | HOH679 |
A | HOH790 |
site_id | AC2 |
残基数 | 19 |
詳細 | binding site for residue CIT A 502 |
鎖名 | 残基 |
A | LYS23 |
A | ASN24 |
A | ILE122 |
A | ARG125 |
A | ASP309 |
A | ARG335 |
A | LEU374 |
A | ARG375 |
A | ARG401 |
A | 0V5501 |
A | HOH636 |
A | HOH647 |
A | HOH652 |
A | HOH670 |
A | HOH736 |
A | HOH742 |
A | HOH865 |
A | HOH1066 |
A | HOH1154 |
site_id | AC3 |
残基数 | 4 |
詳細 | binding site for residue CL A 503 |
鎖名 | 残基 |
A | SER115 |
A | GLY146 |
A | TYR147 |
B | ARG344 |
site_id | AC4 |
残基数 | 5 |
詳細 | binding site for residue EDO B 502 |
鎖名 | 残基 |
B | HIS226 |
B | LYS299 |
B | HOH908 |
B | HOH952 |
B | HOH1058 |
site_id | AC5 |
残基数 | 25 |
詳細 | binding site for residue CIT B 503 |
鎖名 | 残基 |
B | LYS23 |
B | ASN24 |
B | ILE122 |
B | ARG125 |
B | ASP309 |
B | PHE332 |
B | ARG335 |
B | LEU374 |
B | ARG375 |
B | ARG401 |
B | 0V5501 |
B | HOH633 |
B | HOH638 |
B | HOH665 |
B | HOH705 |
B | HOH716 |
B | HOH746 |
B | HOH774 |
B | HOH779 |
B | HOH827 |
B | HOH912 |
B | HOH927 |
B | HOH1039 |
B | HOH1091 |
B | HOH1169 |
site_id | AC6 |
残基数 | 1 |
詳細 | binding site for residue CL B 504 |
鎖名 | 残基 |
B | ASN203 |
site_id | AC7 |
残基数 | 14 |
詳細 | binding site for Di-peptide 0V5 B 501 and CYS B 120 |
鎖名 | 残基 |
A | GLU340 |
A | HOH646 |
B | ARG96 |
B | GLY119 |
B | THR121 |
B | ILE122 |
B | GLY123 |
B | ARG125 |
B | ARG401 |
B | CIT503 |
B | HOH674 |
B | HOH679 |
B | HOH686 |
B | HOH776 |
SwissProt/UniProtに記載されている蛋白質分子機能情報
site_id | SWS_FT_FI1 |
残基数 | 2 |
詳細 | ACT_SITE: Proton donor => ECO:0000255|HAMAP-Rule:MF_00111 |
鎖名 | 残基 | 詳細 |
A | CYS120 | |
B | CYS120 |
site_id | SWS_FT_FI2 |
残基数 | 10 |
詳細 | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00111 |
鎖名 | 残基 | 詳細 |
A | LYS23 | |
B | VAL331 | |
A | ARG96 | |
A | ARG125 | |
A | ASP309 | |
A | VAL331 | |
B | LYS23 | |
B | ARG96 | |
B | ARG125 | |
B | ASP309 |
site_id | SWS_FT_FI3 |
残基数 | 2 |
詳細 | MOD_RES: 2-(S-cysteinyl)pyruvic acid O-phosphothioketal => ECO:0000255|HAMAP-Rule:MF_00111 |
鎖名 | 残基 | 詳細 |
A | CYS120 | |
B | CYS120 |