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6G20

Crystal structure of a fluorescence optimized bathy phytochrome PAiRFP2 derived from wild-type Agp2 in its functional Meta-F intermediate state.

Functional Information from GO Data
ChainGOidnamespacecontents
A0006355biological_processregulation of DNA-templated transcription
A0009584biological_processdetection of visible light
B0006355biological_processregulation of DNA-templated transcription
B0009584biological_processdetection of visible light
Functional Information from PDB Data
site_idAC1
Number of Residues21
Detailsbinding site for residue EL5 A 601
ChainResidue
ALEU10
AARG242
APHE244
ASER245
AHIS248
ATYR251
ASER262
AHIS278
ALEU457
AHOH707
AHOH780
ACYS13
AHOH781
AHOH795
AGLU16
APHE192
AASP196
AILE197
APRO198
ATYR205
AARG211

site_idAC2
Number of Residues9
Detailsbinding site for residue SO4 A 602
ChainResidue
AARG328
AARG328
AARG328
AHIS332
AHIS332
AHIS332
AHOH731
AHOH731
AHOH731

site_idAC3
Number of Residues4
Detailsbinding site for residue SO4 A 603
ChainResidue
ASER141
AGLU143
AARG349
ASO4607

site_idAC4
Number of Residues3
Detailsbinding site for residue SO4 A 604
ChainResidue
ALYS180
APRO372
AHIS373

site_idAC5
Number of Residues2
Detailsbinding site for residue SO4 A 605
ChainResidue
APRO377
AARG381

site_idAC6
Number of Residues4
Detailsbinding site for residue SO4 A 606
ChainResidue
AGLY67
ALYS68
AARG69
ASER96

site_idAC7
Number of Residues5
Detailsbinding site for residue SO4 A 607
ChainResidue
ASER141
AVAL142
AGLU143
AARG311
ASO4603

site_idAC8
Number of Residues2
Detailsbinding site for residue SO4 A 608
ChainResidue
AARG166
ALYS174

site_idAC9
Number of Residues4
Detailsbinding site for residue SO4 A 609
ChainResidue
AARG312
ASER478
AGLU479
AALA480

site_idAD1
Number of Residues3
Detailsbinding site for residue SO4 A 610
ChainResidue
AHIS332
AHIS332
AHIS332

site_idAD2
Number of Residues2
Detailsbinding site for residue SO4 A 611
ChainResidue
AARG378
AARG381

site_idAD3
Number of Residues3
Detailsbinding site for residue CL A 612
ChainResidue
ATRP272
ALYS308
AARG311

site_idAD4
Number of Residues4
Detailsbinding site for residue GOL A 613
ChainResidue
AALA348
ACYS353
AASP354
AHIS367

site_idAD5
Number of Residues7
Detailsbinding site for residue GOL A 614
ChainResidue
AGLU337
ALEU340
AVAL360
AILE419
AASP425
AALA496
AHOH730

site_idAD6
Number of Residues7
Detailsbinding site for residue GOL A 615
ChainResidue
AGLU168
AASP170
AALA172
AILE434
ATRP466
AGLN475
AHOH715

site_idAD7
Number of Residues4
Detailsbinding site for residue PEG A 616
ChainResidue
AALA331
AARG333
AHIS498
ALEU502

site_idAD8
Number of Residues7
Detailsbinding site for residue ETE A 617
ChainResidue
ATYR23
APRO26
AASP215
AGLY218
AASN243
APRO246
AHOH757

site_idAD9
Number of Residues21
Detailsbinding site for residue EL5 B 601
ChainResidue
BARG242
BPHE244
BSER245
BHIS248
BTYR251
BSER260
BSER262
BHIS278
BLEU457
BHOH707
BHOH713
BHOH718
BHOH787
BCYS13
BTYR165
BPHE192
BSER195
BASP196
BILE197
BPRO198
BTYR205

site_idAE1
Number of Residues9
Detailsbinding site for residue SO4 B 602
ChainResidue
BARG328
BARG328
BARG328
BHIS332
BHIS332
BHIS332
BHOH723
BHOH723
BHOH723

site_idAE2
Number of Residues4
Detailsbinding site for residue SO4 B 603
ChainResidue
BLYS180
BPRO182
BPRO372
BHIS373

site_idAE3
Number of Residues4
Detailsbinding site for residue SO4 B 604
ChainResidue
BSER141
BGLU143
BARG349
BSO4608

site_idAE4
Number of Residues3
Detailsbinding site for residue SO4 B 605
ChainResidue
BPRO377
BARG381
BHOH727

site_idAE5
Number of Residues5
Detailsbinding site for residue SO4 B 606
ChainResidue
BARG312
BSER478
BGLU479
BALA480
BHOH794

site_idAE6
Number of Residues1
Detailsbinding site for residue SO4 B 607
ChainResidue
BARG283

site_idAE7
Number of Residues5
Detailsbinding site for residue SO4 B 608
ChainResidue
BSER141
BVAL142
BGLU143
BARG311
BSO4604

site_idAE8
Number of Residues3
Detailsbinding site for residue SO4 B 609
ChainResidue
BHIS332
BHIS332
BHIS332

site_idAE9
Number of Residues2
Detailsbinding site for residue SO4 B 610
ChainResidue
BARG166
BLYS174

site_idAF1
Number of Residues7
Detailsbinding site for residue SO4 B 611
ChainResidue
BARG312
BARG312
BLEU313
BLEU313
BILE316
BGLU483
BGLU483

site_idAF2
Number of Residues4
Detailsbinding site for residue CL B 612
ChainResidue
BGLY127
BALA129
BARG130
BHOH824

site_idAF3
Number of Residues6
Detailsbinding site for residue GOL B 613
ChainResidue
BLEU336
BLEU340
BILE419
BASP425
BALA496
BHOH704

site_idAF4
Number of Residues5
Detailsbinding site for residue GOL B 614
ChainResidue
BVAL142
BARG166
BTRP272
BLYS308
BARG311

site_idAF5
Number of Residues3
Detailsbinding site for residue GOL B 615
ChainResidue
BCYS353
BASP354
BHIS367

site_idAF6
Number of Residues6
Detailsbinding site for residue PG0 B 616
ChainResidue
BALA331
BARG333
BHIS498
BHIS499
BLEU502
BHOH801

site_idAF7
Number of Residues8
Detailsbinding site for residue ETE B 617
ChainResidue
BTYR23
BPRO26
BASP215
BGLY218
BPRO220
BASN243
BCYS249
BHOH741

225158

數據於2024-09-18公開中

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