3M1R

The crystal structure of formimidoylglutamase from Bacillus subtilis subsp. subtilis str. 168

GO（遺伝子オントロジー）由来の情報

鎖名	GO（遺伝子オントロジー）id	名前空間	内容
A	0006547	biological_process	histidine metabolic process
A	0006548	biological_process	histidine catabolic process
A	0008783	molecular_function	agmatinase activity
A	0016787	molecular_function	hydrolase activity
A	0016813	molecular_function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
A	0019556	biological_process	histidine catabolic process to glutamate and formamide
A	0019557	biological_process	histidine catabolic process to glutamate and formate
A	0030145	molecular_function	manganese ion binding
A	0033389	biological_process	putrescine biosynthetic process from arginine, using agmatinase
A	0046872	molecular_function	metal ion binding
A	0050415	molecular_function	formimidoylglutamase activity
B	0006547	biological_process	histidine metabolic process
B	0006548	biological_process	histidine catabolic process
B	0008783	molecular_function	agmatinase activity
B	0016787	molecular_function	hydrolase activity
B	0016813	molecular_function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
B	0019556	biological_process	histidine catabolic process to glutamate and formamide
B	0019557	biological_process	histidine catabolic process to glutamate and formate
B	0030145	molecular_function	manganese ion binding
B	0033389	biological_process	putrescine biosynthetic process from arginine, using agmatinase
B	0046872	molecular_function	metal ion binding
B	0050415	molecular_function	formimidoylglutamase activity
C	0006547	biological_process	histidine metabolic process
C	0006548	biological_process	histidine catabolic process
C	0008783	molecular_function	agmatinase activity
C	0016787	molecular_function	hydrolase activity
C	0016813	molecular_function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
C	0019556	biological_process	histidine catabolic process to glutamate and formamide
C	0019557	biological_process	histidine catabolic process to glutamate and formate
C	0030145	molecular_function	manganese ion binding
C	0033389	biological_process	putrescine biosynthetic process from arginine, using agmatinase
C	0046872	molecular_function	metal ion binding
C	0050415	molecular_function	formimidoylglutamase activity
D	0006547	biological_process	histidine metabolic process
D	0006548	biological_process	histidine catabolic process
D	0008783	molecular_function	agmatinase activity
D	0016787	molecular_function	hydrolase activity
D	0016813	molecular_function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
D	0019556	biological_process	histidine catabolic process to glutamate and formamide
D	0019557	biological_process	histidine catabolic process to glutamate and formate
D	0030145	molecular_function	manganese ion binding
D	0033389	biological_process	putrescine biosynthetic process from arginine, using agmatinase
D	0046872	molecular_function	metal ion binding
D	0050415	molecular_function	formimidoylglutamase activity
E	0006547	biological_process	histidine metabolic process
E	0006548	biological_process	histidine catabolic process
E	0008783	molecular_function	agmatinase activity
E	0016787	molecular_function	hydrolase activity
E	0016813	molecular_function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
E	0019556	biological_process	histidine catabolic process to glutamate and formamide
E	0019557	biological_process	histidine catabolic process to glutamate and formate
E	0030145	molecular_function	manganese ion binding
E	0033389	biological_process	putrescine biosynthetic process from arginine, using agmatinase
E	0046872	molecular_function	metal ion binding
E	0050415	molecular_function	formimidoylglutamase activity
F	0006547	biological_process	histidine metabolic process
F	0006548	biological_process	histidine catabolic process
F	0008783	molecular_function	agmatinase activity
F	0016787	molecular_function	hydrolase activity
F	0016813	molecular_function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
F	0019556	biological_process	histidine catabolic process to glutamate and formamide
F	0019557	biological_process	histidine catabolic process to glutamate and formate
F	0030145	molecular_function	manganese ion binding
F	0033389	biological_process	putrescine biosynthetic process from arginine, using agmatinase
F	0046872	molecular_function	metal ion binding
F	0050415	molecular_function	formimidoylglutamase activity

PDBデータベースに由来する情報

site_id	AC1
残基数	3
詳細	BINDING SITE FOR RESIDUE CL A 320

鎖名	残基
A	ASN127
A	ASP154
A	CA322

site_id	AC2
残基数	3
詳細	BINDING SITE FOR RESIDUE CL A 321

鎖名	残基
A	HIS51
A	THR291
D	HIS51

site_id	AC3
残基数	6
詳細	BINDING SITE FOR RESIDUE CA A 322

鎖名	残基
A	ASP244
A	CL320
A	CA323
A	ASP150
A	HIS152
A	ASP242

site_id	AC4
残基数	5
詳細	BINDING SITE FOR RESIDUE CA A 323

鎖名	残基
A	ASN127
A	ASP150
A	ASP154
A	ASP242
A	CA322

site_id	AC5
残基数	5
詳細	BINDING SITE FOR RESIDUE PEG A 324

鎖名	残基
A	SER55
A	PHE56
A	PRO58
A	GLY59
A	THR60

site_id	AC6
残基数	7
詳細	BINDING SITE FOR RESIDUE PEG A 325

鎖名	残基
A	GLU190
A	PHE191
A	PRO259
A	PEG326
B	ASP265
B	HIS304
B	HIS308

site_id	AC7
残基数	5
詳細	BINDING SITE FOR RESIDUE PEG A 326

鎖名	残基
A	MSE211
A	ASP212
A	ARG215
A	GLY260
A	PEG325

site_id	AC8
残基数	3
詳細	BINDING SITE FOR RESIDUE CL B 320

鎖名	残基
B	ASP154
B	CA322
B	CA323

site_id	AC9
残基数	2
詳細	BINDING SITE FOR RESIDUE CL B 321

鎖名	残基
B	HIS51
E	HIS51

site_id	BC1
残基数	6
詳細	BINDING SITE FOR RESIDUE CA B 322

鎖名	残基
B	ASP150
B	HIS152
B	ASP242
B	ASP244
B	CL320
B	CA323

site_id	BC2
残基数	6
詳細	BINDING SITE FOR RESIDUE CA B 323

鎖名	残基
B	ASN127
B	ASP150
B	ASP154
B	ASP242
B	CL320
B	CA322

site_id	BC3
残基数	6
詳細	BINDING SITE FOR RESIDUE PEG B 324

鎖名	残基
B	ALA151
B	HIS152
B	ARG189
B	SER192
B	ASP244
B	ALA256

site_id	BC4
残基数	3
詳細	BINDING SITE FOR RESIDUE PEG B 325

鎖名	残基
B	ARG295
B	ASP296
B	HOH327

site_id	BC5
残基数	10
詳細	BINDING SITE FOR RESIDUE CAC C 320

鎖名	残基
A	SER249
A	PRO252
A	PHE294
A	MSE297
B	SER249
B	PHE294
C	SER249
C	PRO252
C	PHE294
C	MSE297

site_id	BC6
残基数	4
詳細	BINDING SITE FOR RESIDUE CL C 321

鎖名	残基
C	HIS152
C	ASP154
C	CA323
C	CA324

site_id	BC7
残基数	3
詳細	BINDING SITE FOR RESIDUE CL C 322

鎖名	残基
C	HIS51
C	THR291
F	HIS51

site_id	BC8
残基数	6
詳細	BINDING SITE FOR RESIDUE CA C 323

鎖名	残基
C	ASP150
C	HIS152
C	ASP242
C	ASP244
C	CL321
C	CA324

site_id	BC9
残基数	6
詳細	BINDING SITE FOR RESIDUE CA C 324

鎖名	残基
C	ASN127
C	ASP150
C	ASP154
C	ASP242
C	CL321
C	CA323

site_id	CC1
残基数	2
詳細	BINDING SITE FOR RESIDUE PEG C 325

鎖名	残基
C	GLY31
F	LYS224

site_id	CC2
残基数	4
詳細	BINDING SITE FOR RESIDUE PEG C 326

鎖名	残基
C	SER23
C	ILE26
C	LYS66
C	ASP86

site_id	CC3
残基数	6
詳細	BINDING SITE FOR RESIDUE PEG C 327

鎖名	残基
C	ASP244
C	ALA256
C	ALA151
C	HIS152
C	ARG189
C	SER192

site_id	CC4
残基数	6
詳細	BINDING SITE FOR RESIDUE PEG C 328

鎖名	残基
B	GLU190
B	PRO259
B	GLY260
C	ASP265
C	HIS304
C	HIS308

site_id	CC5
残基数	4
詳細	BINDING SITE FOR RESIDUE PEG C 329

鎖名	残基
C	PRO116
C	LYS141
C	PHE236
C	VAL280

site_id	CC6
残基数	2
詳細	BINDING SITE FOR RESIDUE PEG C 330

鎖名	残基
C	ASP265
C	GLU266

site_id	CC7
残基数	2
詳細	BINDING SITE FOR RESIDUE PEG C 331

鎖名	残基
C	SER55
E	SER12

site_id	CC8
残基数	3
詳細	BINDING SITE FOR RESIDUE CL D 320

鎖名	残基
D	ASP154
D	CA321
D	CA322

site_id	CC9
残基数	6
詳細	BINDING SITE FOR RESIDUE CA D 321

鎖名	残基
D	ASP150
D	HIS152
D	ASP242
D	ASP244
D	CL320
D	CA322

site_id	DC1
残基数	6
詳細	BINDING SITE FOR RESIDUE CA D 322

鎖名	残基
D	ASN127
D	ASP150
D	ASP154
D	ASP242
D	CL320
D	CA321

site_id	DC2
残基数	7
詳細	BINDING SITE FOR RESIDUE PEG D 323

鎖名	残基
D	ALA151
D	HIS152
D	ARG189
D	SER192
D	ASP244
D	ALA256
D	HOH352

site_id	DC3
残基数	6
詳細	BINDING SITE FOR RESIDUE PEG D 324

鎖名	残基
D	GLU269
D	HIS304
D	HIS308
E	GLU190
E	PHE191
E	PRO259

site_id	DC4
残基数	11
詳細	BINDING SITE FOR RESIDUE CAC E 320

鎖名	残基
D	SER249
D	PHE294
D	MSE297
E	SER249
E	PRO252
E	PHE294
E	MSE297
F	SER249
F	PRO252
F	PHE294
F	MSE297

site_id	DC5
残基数	3
詳細	BINDING SITE FOR RESIDUE CL E 321

鎖名	残基
E	ASP154
E	CA322
E	CA323

site_id	DC6
残基数	6
詳細	BINDING SITE FOR RESIDUE CA E 322

鎖名	残基
E	ASP150
E	HIS152
E	ASP242
E	ASP244
E	CL321
E	CA323

site_id	DC7
残基数	6
詳細	BINDING SITE FOR RESIDUE CA E 323

鎖名	残基
E	ASN127
E	ASP150
E	ASP154
E	ASP242
E	CL321
E	CA322

site_id	DC8
残基数	7
詳細	BINDING SITE FOR RESIDUE PEG E 324

鎖名	残基
E	ALA151
E	HIS152
E	ARG189
E	SER192
E	ASP244
E	ALA256
E	HOH355

site_id	DC9
残基数	2
詳細	BINDING SITE FOR RESIDUE PEG E 325

鎖名	残基
E	ASP293
E	ARG295

site_id	EC1
残基数	6
詳細	BINDING SITE FOR RESIDUE PEG E 326

鎖名	残基
E	ASP265
E	HIS304
E	HIS308
F	GLU190
F	PHE191
F	PRO259

site_id	EC2
残基数	3
詳細	BINDING SITE FOR RESIDUE CL F 320

鎖名	残基
F	ASP154
F	CA321
F	CA322

site_id	EC3
残基数	6
詳細	BINDING SITE FOR RESIDUE CA F 321

鎖名	残基
F	ASP150
F	HIS152
F	ASP242
F	ASP244
F	CL320
F	CA322

site_id	EC4
残基数	6
詳細	BINDING SITE FOR RESIDUE CA F 322

鎖名	残基
F	ASN127
F	ASP150
F	ASP154
F	ASP242
F	CL320
F	CA321

site_id	EC5
残基数	4
詳細	BINDING SITE FOR RESIDUE PEG F 323

鎖名	残基
D	LEU292
F	PHE294
F	ARG295
F	HOH349

site_id	EC6
残基数	7
詳細	BINDING SITE FOR RESIDUE PEG F 324

鎖名	残基
D	GLU190
D	PHE191
D	GLY260
F	ASP265
F	GLU269
F	HIS304
F	HIS308

site_id	EC7
残基数	4
詳細	BINDING SITE FOR RESIDUE PEG F 325

鎖名	残基
A	LEU7
F	TRP29
F	ASP86
F	LEU87

site_id	EC8
残基数	2
詳細	BINDING SITE FOR RESIDUE PEG F 326

鎖名	残基
F	PRO43
F	ILE92

site_id	EC9
残基数	3
詳細	BINDING SITE FOR RESIDUE PEG F 327

鎖名	残基
F	ASP232
F	THR234
F	ASP235

site_id	FC1
残基数	7
詳細	BINDING SITE FOR RESIDUE PEG F 328

鎖名	残基
F	ALA151
F	HIS152
F	ARG189
F	SER192
F	ASP244
F	ALA256
F	HOH346

UniProtにおけるモチーフ・データベースPROSITEからの機能情報

site_id	PS01053
残基数	22
詳細	ARGINASE_1 Arginase family signature. SVDMDvldQshaPGcpaigpgG

鎖名	残基	詳細
A	SER240-GLY261

SwissProt/UniProtに記載されている蛋白質分子機能情報

site_id	SWS_FT_FI1
残基数	36
詳細	BINDING: BINDING => ECO:0000255\|HAMAP-Rule:MF_00737, ECO:0000305\|Ref.4

鎖名	残基	詳細
A	ASN127
B	ASP154
B	ASP242
B	ASP244
C	ASN127
C	ASP150
C	HIS152
C	ASP154
C	ASP242
C	ASP244
D	ASN127
A	ASP150
D	ASP150
D	HIS152
D	ASP154
D	ASP242
D	ASP244
E	ASN127
E	ASP150
E	HIS152
E	ASP154
E	ASP242
A	HIS152
E	ASP244
F	ASN127
F	ASP150
F	HIS152
F	ASP154
F	ASP242
F	ASP244
A	ASP154
A	ASP242
A	ASP244
B	ASN127
B	ASP150
B	HIS152

		Sequence (fasta)
		PDBx/mmCIF
		PDBML (ヘッダのみ (no-atom))
		PDB形式 (全ての情報)
		検証レポート (PDF)
		EDMap 2fo-fc (MTZ)