2V0G
LEUCYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH A tRNA(leu) transcript with 5-FLUORO-1,3-DIHYDRO-1-HYDROXY-2,1- BENZOXABOROLE (AN2690) forming an adduct to the ribose of adenosine- 76 in the enzyme editing site.
GO(遺伝子オントロジー)由来の情報
鎖名 | GO(遺伝子オントロジー)id | 名前空間 | 内容 |
A | 0000166 | molecular_function | nucleotide binding |
A | 0002161 | molecular_function | aminoacyl-tRNA editing activity |
A | 0004812 | molecular_function | aminoacyl-tRNA ligase activity |
A | 0004823 | molecular_function | leucine-tRNA ligase activity |
A | 0005524 | molecular_function | ATP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0006412 | biological_process | translation |
A | 0006418 | biological_process | tRNA aminoacylation for protein translation |
A | 0006429 | biological_process | leucyl-tRNA aminoacylation |
A | 0046872 | molecular_function | metal ion binding |
A | 0106074 | biological_process | aminoacyl-tRNA metabolism involved in translational fidelity |
D | 0000166 | molecular_function | nucleotide binding |
D | 0002161 | molecular_function | aminoacyl-tRNA editing activity |
D | 0004812 | molecular_function | aminoacyl-tRNA ligase activity |
D | 0004823 | molecular_function | leucine-tRNA ligase activity |
D | 0005524 | molecular_function | ATP binding |
D | 0005737 | cellular_component | cytoplasm |
D | 0005829 | cellular_component | cytosol |
D | 0006412 | biological_process | translation |
D | 0006418 | biological_process | tRNA aminoacylation for protein translation |
D | 0006429 | biological_process | leucyl-tRNA aminoacylation |
D | 0046872 | molecular_function | metal ion binding |
D | 0106074 | biological_process | aminoacyl-tRNA metabolism involved in translational fidelity |
PDBデータベースに由来する情報
site_id | AC1 |
残基数 | 4 |
詳細 | BINDING SITE FOR RESIDUE ZN A1877 |
鎖名 | 残基 |
A | CYS439 |
A | CYS442 |
A | CYS484 |
A | CYS487 |
site_id | AC2 |
残基数 | 4 |
詳細 | BINDING SITE FOR RESIDUE ZN A1878 |
鎖名 | 残基 |
A | CYS159 |
A | CYS162 |
A | CYS176 |
A | HIS179 |
site_id | AC3 |
残基数 | 3 |
詳細 | BINDING SITE FOR RESIDUE HG A1879 |
鎖名 | 残基 |
A | CYS128 |
A | GLU129 |
A | TYR102 |
site_id | AC4 |
残基数 | 1 |
詳細 | BINDING SITE FOR RESIDUE SO4 A1880 |
鎖名 | 残基 |
A | ARG762 |
site_id | AC5 |
残基数 | 3 |
詳細 | BINDING SITE FOR RESIDUE SO4 A1881 |
鎖名 | 残基 |
A | GLY707 |
A | ARG769 |
A | TRP795 |
site_id | AC6 |
残基数 | 4 |
詳細 | BINDING SITE FOR RESIDUE SO4 A1882 |
鎖名 | 残基 |
A | HIS49 |
A | HIS52 |
A | SER639 |
A | LYS640 |
site_id | AC7 |
残基数 | 1 |
詳細 | BINDING SITE FOR RESIDUE SO4 A1883 |
鎖名 | 残基 |
A | ARG759 |
site_id | AC8 |
残基数 | 1 |
詳細 | BINDING SITE FOR RESIDUE SO4 A1884 |
鎖名 | 残基 |
A | LYS288 |
site_id | AC9 |
残基数 | 4 |
詳細 | BINDING SITE FOR RESIDUE SO4 A1885 |
鎖名 | 残基 |
A | ARG32 |
A | GLN69 |
A | GLY70 |
A | TYR71 |
site_id | BC1 |
残基数 | 5 |
詳細 | BINDING SITE FOR RESIDUE SO4 A1886 |
鎖名 | 残基 |
A | GLU264 |
A | LEU329 |
A | PHE330 |
A | GLY331 |
A | ARG420 |
site_id | BC2 |
残基数 | 6 |
詳細 | BINDING SITE FOR RESIDUE SO4 D1877 |
鎖名 | 残基 |
D | SER706 |
D | GLY707 |
D | VAL708 |
D | ARG769 |
D | ARG773 |
D | TRP795 |
site_id | BC3 |
残基数 | 1 |
詳細 | BINDING SITE FOR RESIDUE SO4 D1878 |
鎖名 | 残基 |
D | ARG759 |
site_id | BC4 |
残基数 | 4 |
詳細 | BINDING SITE FOR RESIDUE SO4 D1879 |
鎖名 | 残基 |
D | GLU264 |
D | PHE330 |
D | GLY331 |
D | ARG420 |
site_id | BC5 |
残基数 | 3 |
詳細 | BINDING SITE FOR RESIDUE ZN D1880 |
鎖名 | 残基 |
D | CYS439 |
D | CYS484 |
D | CYS487 |
site_id | BC6 |
残基数 | 4 |
詳細 | BINDING SITE FOR RESIDUE ZN D1881 |
鎖名 | 残基 |
D | CYS159 |
D | CYS162 |
D | CYS176 |
D | HIS179 |
site_id | BC7 |
残基数 | 2 |
詳細 | BINDING SITE FOR RESIDUE HG D1882 |
鎖名 | 残基 |
D | CYS128 |
D | GLU129 |
site_id | BC8 |
残基数 | 8 |
詳細 | BINDING SITE FOR RESIDUE LEU A1887 |
鎖名 | 残基 |
A | MET40 |
A | PHE41 |
A | TYR43 |
A | ASP80 |
A | SER504 |
A | TYR535 |
A | HIS541 |
A | HIS545 |
site_id | BC9 |
残基数 | 4 |
詳細 | BINDING SITE FOR RESIDUE LEU D1883 |
鎖名 | 残基 |
D | PHE41 |
D | PRO42 |
D | TYR43 |
D | HIS541 |
UniProtにおけるモチーフ・データベースPROSITEからの機能情報
site_id | PS00178 |
残基数 | 12 |
詳細 | AA_TRNA_LIGASE_I Aminoacyl-transfer RNA synthetases class-I signature. PypSGdLHMGHL |
鎖名 | 残基 | 詳細 |
A | PRO42-LEU53 |