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2DT5

Crystal Structure of TTHA1657 (AT-rich DNA-binding protein) from Thermus thermophilus HB8

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003700molecular_functionDNA-binding transcription factor activity
A0005737cellular_componentcytoplasm
A0006355biological_processregulation of DNA-templated transcription
A0045892biological_processnegative regulation of DNA-templated transcription
A0051775biological_processresponse to redox state
B0003677molecular_functionDNA binding
B0003700molecular_functionDNA-binding transcription factor activity
B0005737cellular_componentcytoplasm
B0006355biological_processregulation of DNA-templated transcription
B0045892biological_processnegative regulation of DNA-templated transcription
B0051775biological_processresponse to redox state
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 401
ChainResidue
ASER30
ASER31
AARG58
AGLY61
AHOH629

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 B 402
ChainResidue
BTHR57
BGLY59
BVAL60
BGLY61
BSER30
BSER31
BARG46
BTYR55

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 403
ChainResidue
AARG72
AASN78
AHOH690

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 B 404
ChainResidue
BARG120
BARG123

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 405
ChainResidue
ATYR98
APRO99
AGLY100
APHE101
AGLY102
AHOH723

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 406
ChainResidue
ALYS155
ALEU159
AHOH676
AHOH683

site_idAC7
Number of Residues32
DetailsBINDING SITE FOR RESIDUE NAD A 301
ChainResidue
AGLY87
AMET88
AGLY89
AARG90
ALEU91
AASP112
AVAL113
AASP114
ALYS117
ATHR147
AVAL148
APRO149
AARG150
AGLU151
APHE171
AALA172
APRO173
AVAL187
APHE189
AHOH602
AHOH604
AHOH613
AHOH614
AHOH686
AHOH687
AHOH720
BALA94
BLEU95
BTYR98
BPRO99
BPHE189
BHOH461

site_idAC8
Number of Residues31
DetailsBINDING SITE FOR RESIDUE NAD B 302
ChainResidue
AALA94
ALEU95
ATYR98
AHOH612
BVAL86
BGLY87
BGLY89
BARG90
BLEU91
BASP112
BVAL113
BASP114
BLYS117
BTHR147
BVAL148
BPRO149
BARG150
BALA152
BPHE171
BALA172
BPRO173
BVAL187
BPHE189
BHOH407
BHOH411
BHOH446
BHOH447
BHOH449
BHOH464
BHOH490
BHOH498

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 601
ChainResidue
AGLY25
AVAL26
AHIS27
AARG28
AHOH738

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues78
DetailsDNA_BIND: H-T-H motif => ECO:0000255|HAMAP-Rule:MF_01131
ChainResidueDetails
ATHR13-PHE52
BTHR13-PHE52

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01131
ChainResidueDetails
AGLY87
BGLY87

218853

건을2024-04-24부터공개중

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