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1TGV

Structure of E. coli Uridine Phosphorylase complexed with 5-Fluorouridine and sulfate

GO(遺伝子オントロジー)由来の情報
鎖名GO(遺伝子オントロジー)id名前空間内容
A0003824molecular_functioncatalytic activity
A0004850molecular_functionuridine phosphorylase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006218biological_processuridine catabolic process
A0006974biological_processDNA damage response
A0009116biological_processnucleoside metabolic process
A0009164biological_processnucleoside catabolic process
A0009166biological_processnucleotide catabolic process
A0016757molecular_functionglycosyltransferase activity
A0016763molecular_functionpentosyltransferase activity
A0030955molecular_functionpotassium ion binding
A0032991cellular_componentprotein-containing complex
A0042802molecular_functionidentical protein binding
A0044206biological_processUMP salvage
A0046050biological_processUMP catabolic process
A0047847molecular_functiondeoxyuridine phosphorylase activity
B0003824molecular_functioncatalytic activity
B0004850molecular_functionuridine phosphorylase activity
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006218biological_processuridine catabolic process
B0006974biological_processDNA damage response
B0009116biological_processnucleoside metabolic process
B0009164biological_processnucleoside catabolic process
B0009166biological_processnucleotide catabolic process
B0016757molecular_functionglycosyltransferase activity
B0016763molecular_functionpentosyltransferase activity
B0030955molecular_functionpotassium ion binding
B0032991cellular_componentprotein-containing complex
B0042802molecular_functionidentical protein binding
B0044206biological_processUMP salvage
B0046050biological_processUMP catabolic process
B0047847molecular_functiondeoxyuridine phosphorylase activity
PDBデータベースに由来する情報
site_idAC1
残基数8
詳細BINDING SITE FOR RESIDUE SO4 A 482
鎖名残基
AGLY26
AARG30
AARG91
AILE92
AGLY93
ATHR94
A5UD3001
BARG48

site_idAC2
残基数8
詳細BINDING SITE FOR RESIDUE SO4 B 682
鎖名残基
BGLY26
BARG30
BARG91
BILE92
BGLY93
BTHR94
B5UD5002
AARG48

site_idAC3
残基数6
詳細BINDING SITE FOR RESIDUE K A 1001
鎖名残基
AGLU49
AILE69
ASER73
BGLU49
BILE69
BSER73

site_idAC4
残基数17
詳細BINDING SITE FOR RESIDUE 5UD A 3001
鎖名残基
AARG91
ATHR94
ATHR95
AGLY96
APHE162
AGLN166
AARG168
AGLU196
AMET197
AGLU198
AILE220
AVAL221
ASO4482
AHOH3032
AHOH3035
BPHE7
BHIS8

site_idAC5
残基数17
詳細BINDING SITE FOR RESIDUE 5UD B 5002
鎖名残基
AHIS8
BILE69
BARG91
BTHR94
BTHR95
BGLY96
BPHE162
BGLN166
BARG168
BGLU196
BMET197
BGLU198
BILE220
BVAL221
BSO4682
BHOH5020
BHOH5084

UniProtにおけるモチーフ・データベースPROSITEからの機能情報
site_idPS01232
残基数16
詳細PNP_UDP_1 Purine and other phosphorylases family 1 signature. StGIGgPStSIaveEL
鎖名残基詳細
ASER66-LEU81

CSAにおける酵素触媒機能の情報
site_idCSA1
残基数3
詳細Annotated By Reference To The Literature 1t0u
鎖名残基詳細
AGLU80
AHIS8
AARG223

site_idCSA2
残基数3
詳細Annotated By Reference To The Literature 1t0u
鎖名残基詳細
BGLU80
BHIS8
BARG223

site_idMCSA1
残基数4
詳細M-CSA 787
鎖名残基詳細
AHIS8proton acceptor, proton donor
AGLU80electrostatic stabiliser, polar interaction
AARG168proton acceptor, proton donor
AARG223electrostatic stabiliser, polar interaction

site_idMCSA2
残基数4
詳細M-CSA 787
鎖名残基詳細
BHIS8proton acceptor, proton donor
BGLU80electrostatic stabiliser, polar interaction
BARG168proton acceptor, proton donor
BARG223electrostatic stabiliser, polar interaction

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件を2024-09-18に公開中

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