6QIB
The crystal structure of Pol2CORE in complex with DNA and an incoming nucleotide, carrying an Fe-S cluster
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-3 |
Synchrotron site | ESRF |
Beamline | MASSIF-3 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-03 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 0.96770 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 158.360, 70.402, 154.240 |
Unit cell angles | 90.00, 112.99, 90.00 |
Refinement procedure
Resolution | 78.480 - 2.800 |
R-factor | 0.2265 |
Rwork | 0.223 |
R-free | 0.28560 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4m8o |
RMSD bond length | 0.003 |
RMSD bond angle | 1.057 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.7.2) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0232) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 78.480 | 78.480 | 2.920 |
High resolution limit [Å] | 2.800 | 9.700 | 2.800 |
Rmerge | 0.126 | 0.043 | 1.082 |
Rmeas | 0.143 | 0.050 | 1.224 |
Rpim | 0.066 | 0.024 | 0.561 |
Number of reflections | 38251 | 996 | 4699 |
<I/σ(I)> | 7.8 | ||
Completeness [%] | 98.5 | 99.5 | 99.2 |
Redundancy | 4.3 | 4 | 4.5 |
CC(1/2) | 0.995 | 0.994 | 0.447 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 291 | 10mM Tris HCl pH8, 10mM CaCl2, 15% PEG8000 |