6IH2
Crystal structure of Phosphite Dehydrogenase from Ralstonia sp. 4506
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-12-09 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.9793 |
Spacegroup name | P 2 21 21 |
格子定数 [Å] | 61.653, 97.849, 122.440 |
格子定数 [度] | 90.00, 90.00, 90.00 |
精密化法
残基 | 38.324 - 2.048 |
R因子 | 0.164 |
Rwork | 0.162 |
R-free | 0.19400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4e5m |
結合長の平均二乗偏差(RMSD) [Å] | 0.007 |
結合角の平均二乗偏差(RMSD) [度] | 0.852 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.13_2998: ???)) |
Quality characteristics
Overall | Outer shell | |
分解能 [Å] (低) | 38.324 | 2.120 |
分解能 [Å] (高) | 2.048 | 2.050 |
Rmerge_l_obs | 0.130 | 0.460 |
独立反射数 | 46894 | 4180 |
<I/σ(I)> | 6.6 | |
完全性 [%] | 98.8 | 89.79 |
冗長性 | 12.3 | 12.2 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | EVAPORATION | 8 | 289 | 0.2 M NaCl, 0.1 M Tris-HCl pH 8.0, 25% (w/v) PEG3350 |