5Y9O
The apo structure of Legionella pneumophila WipA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-04-03 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9785 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 93.608, 95.976, 106.635 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.608 - 2.554 |
R-factor | 0.226 |
Rwork | 0.223 |
R-free | 0.28210 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5n6x |
RMSD bond length | 0.007 |
RMSD bond angle | 0.875 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.640 |
High resolution limit [Å] | 2.550 | 2.550 |
Rmerge | 0.250 | 0.991 |
Number of reflections | 31780 | 31604 |
<I/σ(I)> | 16 | 2 |
Completeness [%] | 100.0 | 100 |
Redundancy | 12.5 | 11.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 298 | 14% PEG6000, 0.1 M MES (pH 6.0) and 0.1 M NaCl |