5JA5
Crystal structure of the rice Topless related protein 2 (TPR2) N-terminal topless domain (1-209) L111A and L130A mutant in complex with rice D53 repressor EAR peptide motif
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-08-07 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.078 |
Spacegroup name | P 42 21 2 |
Unit cell lengths | 57.317, 57.317, 173.483 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.612 - 2.000 |
R-factor | 0.2043 |
Rwork | 0.203 |
R-free | 0.22780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4zhe |
RMSD bond length | 0.005 |
RMSD bond angle | 0.847 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.050 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.070 | 0.893 |
Number of reflections | 20502 | |
<I/σ(I)> | 25.9 | 4 |
Completeness [%] | 100.0 | 100 |
Redundancy | 15.6 | 16 |
CC(1/2) | 1.000 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.8 | 293 | 20% w/v Polyethylene glycol 3350, 0.2 M Potassium phosphate monobasic, pH 4.8 |