5GRG
Crystal structure of dual peptide from EBV in complex with HLA-A*11:01
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13B1 |
Synchrotron site | NSRRC |
Beamline | BL13B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-07-10 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9999 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 55.246, 67.432, 115.017 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 58.170 - 1.940 |
R-factor | 0.19177 |
Rwork | 0.189 |
R-free | 0.24295 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1x7q |
RMSD bond length | 0.017 |
RMSD bond angle | 1.777 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0103) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 58.170 |
High resolution limit [Å] | 1.940 |
Number of reflections | 30594 |
<I/σ(I)> | 2.5 |
Completeness [%] | 99.5 |
Redundancy | 4.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 290 | 0.1 M Ammonium acetate, 0.1 M Bis-Tris, 22% PEG 4000 |