4Z5C
HipB-O3 21mer complex
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E+ SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2013-01-04 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | P 31 2 1 |
格子定数 [Å] | 109.027, 109.027, 58.796 |
格子定数 [度] | 90.00, 90.00, 120.00 |
精密化法
残基 | 49.910 - 2.500 |
R因子 | 0.1959 |
Rwork | 0.192 |
R-free | 0.22870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4Z52 |
結合長の平均二乗偏差(RMSD) [Å] | 0.009 |
結合角の平均二乗偏差(RMSD) [度] | 1.110 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.8.2_1309)) |
Quality characteristics
Overall | Inner shell | Outer shell | |
分解能 [Å] (低) | 50.000 | 50.000 | 2.540 |
分解能 [Å] (高) | 2.500 | 6.780 | 2.500 |
Rmerge_l_obs | 0.080 | 0.040 | 0.678 |
Total number of observations | 90409 | ||
独立反射数 | 14130 | ||
<I/σ(I)> | 11.8 | ||
完全性 [%] | 99.2 | 95.1 | 99.3 |
冗長性 | 6.4 | 6.4 | 4.3 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 298 | 0.02 M MgCl2, 0.05 M sodium cacodylate trihydrate, pH 6.0, 5% 2-propanol, 0.001 M spermine |