3OCJ
The crystal structure of a possilbe exported protein from Bordetella parapertussis
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-BM |
Synchrotron site | APS |
Beamline | 19-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-08-06 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.97926 |
Spacegroup name | P 2 2 21 |
格子定数 [Å] | 48.233, 49.312, 145.053 |
格子定数 [度] | 90.00, 90.00, 90.00 |
精密化法
残基 | 24.656 - 1.390 |
R因子 | 0.1885 |
Rwork | 0.187 |
R-free | 0.21100 |
Structure solution method | SAD |
結合長の平均二乗偏差(RMSD) [Å] | 0.006 |
結合角の平均二乗偏差(RMSD) [度] | 1.092 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | SHELXD |
Refinement software | PHENIX ((phenix.refine: 1.5_2)) |
Quality characteristics
Overall | Outer shell | |
分解能 [Å] (低) | 25.000 | 1.410 |
分解能 [Å] (高) | 1.390 | 1.390 |
Rmerge_l_obs | 0.073 | 0.702 |
独立反射数 | 69592 | |
<I/σ(I)> | 33.6 | 1.53 |
完全性 [%] | 98.4 | 97.3 |
冗長性 | 5.5 | 3.1 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 277 | 0.1M imidazole, 1.0M Sodium Acetate, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K |