3KPH
Crystal structure of Mycoplasma arthritidis-derived mitogen
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X4A |
Synchrotron site | NSLS |
Beamline | X4A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2004-09-10 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 1.2757 |
Spacegroup name | P 41 3 2 |
格子定数 [Å] | 181.865, 181.865, 181.865 |
格子定数 [度] | 90.00, 90.00, 90.00 |
精密化法
残基 | 50.000 - 2.800 |
R因子 | 0.253 |
Rwork | 0.253 |
R-free | 0.29900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1r5i |
結合長の平均二乗偏差(RMSD) [Å] | 0.008 |
結合角の平均二乗偏差(RMSD) [度] | 1.400 |
Data reduction software | d*TREK |
Data scaling software | d*TREK |
Phasing software | PHASER |
Refinement software | CNS (1.0) |
Quality characteristics
Overall | Outer shell | |
分解能 [Å] (低) | 50.000 | 2.900 |
分解能 [Å] (高) | 2.800 | 2.800 |
Rmerge_l_obs | 0.117 | 0.692 |
独立反射数 | 24867 | |
<I/σ(I)> | 9.6 | 2.7 |
完全性 [%] | 95.9 | 96.8 |
冗長性 | 6.93 | 5.4 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | VAPOR DIFFUSION | 6.2 | 293 | 13-15% PEG 3350, 0.2 M NaCl, 5% Ethylene glycol, 5% Glycerol, 0.1 M Potassium/sodium phosphate pH 6.2, VAPOR DIFFUSION, temperature 293K |