3EM6
Crystal structure of I50L/A71V mutant of hiv-1 protease in complex with inhibitor darunavir
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 200 |
Detector technology | IMAGE PLATE |
Collection date | 2004-03-28 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
格子定数 [Å] | 51.140, 57.891, 61.364 |
格子定数 [度] | 90.00, 90.00, 90.00 |
精密化法
残基 | 42.260 - 2.100 |
R因子 | 0.188 |
Rwork | 0.186 |
R-free | 0.24000 |
Starting model (for MR) | 1f7a |
結合長の平均二乗偏差(RMSD) [Å] | 0.004 |
結合角の平均二乗偏差(RMSD) [度] | 1.151 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | REFMAC (5.2.0005) |
Quality characteristics
Overall | Inner shell | Outer shell | |
分解能 [Å] (低) | 50.000 | 50.000 | 2.180 |
分解能 [Å] (高) | 2.100 | 4.520 | 2.100 |
Rmerge_l_obs | 0.092 | 0.036 | 0.461 |
独立反射数 | 10762 | ||
<I/σ(I)> | 11.443 | ||
完全性 [%] | 96.6 | 94 | 95.6 |
冗長性 | 3.2 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | VAPOR DIFFUSION, HANGING DROP | 6.2 | 300 | pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 300K |