3DZG
Crystal structure of human CD38 extracellular domain, ara-F-ribose-5'-phosphate/nicotinamide complex
Experimental procedure
| 実験手法 | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | CHESS BEAMLINE A1 |
| Synchrotron site | CHESS |
| Beamline | A1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2007-04-12 |
| Detector | ADSC QUANTUM 210 |
| Spacegroup name | P 1 |
| 格子定数 [Å] | 41.689, 52.812, 65.381 |
| 格子定数 [度] | 106.06, 91.95, 95.12 |
精密化法
| 残基 | 20.000 - 1.650 |
| R因子 | 0.176 |
| Rwork | 0.174 |
| R-free | 0.21100 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1yh3 |
| 結合長の平均二乗偏差(RMSD) [Å] | 0.013 |
| 結合角の平均二乗偏差(RMSD) [度] | 1.504 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.3.0021) |
Quality characteristics
| Overall | Outer shell | |
| 分解能 [Å] (低) | 30.000 | 1.700 |
| 分解能 [Å] (高) | 1.640 | 1.640 |
| Rmerge_l_obs | 0.056 | 0.189 |
| 独立反射数 | 61988 | |
| <I/σ(I)> | 17.5 | 5.7 |
| 完全性 [%] | 96.3 | 86.9 |
| 冗長性 | 3.5 | 3 |
結晶化条件
| 結晶ID | 方法 | pH | 温度 | 溶液条件 |
| 1 | 6 | 298 | 100 mM MES pH 6.0, 15% PEG 4000, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K |
