1P5W
The structures of host range controlling regions of the capsids of canine and feline parvoviruses and mutants
Experimental procedure
| 実験手法 | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | CHESS BEAMLINE F1 |
| Synchrotron site | CHESS |
| Beamline | F1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Detector | ADSC QUANTUM 4 |
| Spacegroup name | P 21 21 21 |
| 格子定数 [Å] | 372.417, 373.017, 377.083 |
| 格子定数 [度] | 90.00, 90.00, 90.00 |
精密化法
| 残基 | 10.000 - 3.300 |
| R因子 | 0.2 |
| Rwork | 0.200 |
| R-free | 0.20200 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | FPV |
| 結合長の平均二乗偏差(RMSD) [Å] | 0.008 * |
| 結合角の平均二乗偏差(RMSD) [度] | 1.420 * |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | AMoRE |
| Refinement software | CNS |
Quality characteristics
| Overall | Outer shell | |
| 分解能 [Å] (低) | 10.000 | 3.500 |
| 分解能 [Å] (高) | 3.300 | 3.300 |
| Rmerge_l_obs | 0.131 * | 0.198 * |
| 独立反射数 | 448898 | |
| 完全性 [%] | 70.5 | 61.2 * |
結晶化条件
| 結晶ID | 方法 | pH | 温度 | 溶液条件 |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 20 * | PEG8000, CaCl2, Tris.HCL, pH 7.5, VAPOR DIFFUSION, SITTING DROP |
結晶化試薬
| ID | 結晶ID | 濃度 | 試薬名 | 濃度 (単位) | 詳細 |
| 1 | 1 | 1 | PEG8000 | ||
| 2 | 1 | 1 | CaCl2 | ||
| 3 | 1 | 1 | Tris.HCL | ||
| 4 | 1 | 2 | CaCl2 |
文献の結晶化試薬
| ID | 結晶ID | 溶液 | 試薬名 | 濃度 (単位) (単位) | 詳細 |
| 1 | 1 | reservoir | 1 (%) | ||
| 2 | 1 | reservoir | 8 (mM) | ||
| 3 | 1 | reservoir | Tris-HCl | 20 (mM) | pH7.2 |
