1LVM
CATALYTICALLY ACTIVE TOBACCO ETCH VIRUS PROTEASE COMPLEXED WITH PRODUCT
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X9B |
Synchrotron site | NSLS |
Beamline | X9B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2001-01-18 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.92 |
Spacegroup name | P 43 21 2 |
格子定数 [Å] | 75.505, 75.505, 183.167 |
格子定数 [度] | 90.00, 90.00, 90.00 |
精密化法
残基 | 30.000 * - 1.800 |
Rwork | 0.171 |
R-free | 0.22900 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1lvb |
結合長の平均二乗偏差(RMSD) [Å] | 0.020 |
結合角の平均二乗偏差(RMSD) [度] | 1.900 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.0) |
Quality characteristics
Overall | Outer shell | |
分解能 [Å] (低) | 30.000 * | 1.860 |
分解能 [Å] (高) | 1.800 | 1.800 |
Rmerge_l_obs | 0.058 | |
独立反射数 | 49988 * | |
完全性 [%] | 99.8 * | 99.3 |
冗長性 | 6.2 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 298 | ammonium sulfate, magnesium chloride, Tris-HCl, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
文献の結晶化試薬
ID | 結晶ID | 溶液 | 試薬名 | 濃度 (単位) (単位) | 詳細 |
1 | 1 | drop | protein | 4.5 (mg/ml) | pH8.5 |
2 | 1 | reservoir | Tris-HCl | 0.1 (M) | |
3 | 1 | reservoir | 0.2 (M) | ||
4 | 1 | reservoir | glycerol | 10 (%) | |
5 | 1 | reservoir | ammonium sulfate | 2.0 (M) |