1LOZ
AMYLOIDOGENIC VARIANT (I56T) VARIANT OF HUMAN LYSOZYME
Experimental procedure
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 288 |
Detector technology | IMAGE PLATE |
Collection date | 1995-02 |
Detector | MARRESEARCH |
Spacegroup name | P 21 21 21 |
格子定数 [Å] | 56.847, 60.889, 33.699 |
格子定数 [度] | 90.00, 90.00, 90.00 |
精密化法
残基 | 8.000 - 1.800 |
R因子 | 0.211 * |
Rwork | 0.211 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1LZM |
結合長の平均二乗偏差(RMSD) [Å] | 0.013 |
結合角の平均二乗偏差(RMSD) [度] | 24.500 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | X-PLOR (3.1) |
Refinement software | X-PLOR (3.1) |
Quality characteristics
Overall | Outer shell | |
分解能 [Å] (低) | 15.000 | 1.860 |
分解能 [Å] (高) | 1.800 | 1.800 |
Rmerge_l_obs | 0.092 | 0.240 |
Total number of observations | 49524 * | |
独立反射数 | 10578 | |
<I/σ(I)> | 11.2 | 3.6 |
完全性 [%] | 92.8 | 87.2 |
冗長性 | 4.7 | 2.6 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | VAPOR DIFFUSION | 4 | THE PROTEIN WAS CRYSTALLIZED FROM 0.16M AMMONIUM SULFATE, 24% PEG 8000 BY VAPOR DIFFUSION., pH 4.0, vapor diffusion |
文献の結晶化試薬
ID | 結晶ID | 溶液 | 試薬名 | 濃度 (単位) (単位) | 詳細 |
1 | 1 | drop | protein | 5 (mg/ml) | |
2 | 1 | drop | HEPES | 5 (mM) | |
3 | 1 | drop | 0.2-0.25 (M) | ||
4 | 1 | drop | ammonium sulfate | 0.08 (M) | |
5 | 1 | drop | PEG8000 | 12 (%) | |
6 | 1 | reservoir | ammonium sulfate | 0.16 (M) | |
7 | 1 | reservoir | PEG8000 | 24 (%) |