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Legacy flatfile-incompatible PDB entries
8UD8
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Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution
Descriptor: (4S,5aS,8S,8aR)-4-(2-methylpropyl)-N-[(1R,5Z,7R,8R,9R,10R,11S,12R)-10,11,12-trihydroxy-7-methyl-13-oxa-2-thiabicyclo[7.3.1]tridec-5-en-8-yl]octahydro-2H-oxepino[2,3-c]pyrrole-8-carboxamide (non-preferred name), 16S Ribosomal RNA, 23S Ribosomal RNA, ...
Authors:Aleksandrova, E.V, Syroegin, E.A, Wu, K.J.Y, Tresco, B.I.C, Ramkissoon, A, See, D.N.Y, Liow, P, Dittemore, G.A, Yu, M, Testolin, G, Mitcheltree, M.J, Liu, R.Y, Svetlov, M.S, Myers, A.G, Polikanov, Y.S.
Deposit date:2023-09-28
Release date:2024-02-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:An antibiotic preorganized for ribosomal binding overcomes antimicrobial resistance.
Science, 383, 2024
8UEJ
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BU of 8uej by Molmil
ssRNA phage PhiCb5 virion
Descriptor: CALCIUM ION, Coat protein, Maturation protein
Authors:Wang, Y, Zhang, J.
Deposit date:2023-10-01
Release date:2024-05-15
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural mechanisms of Tad pilus assembly and its interaction with an RNA virus.
Sci Adv, 10, 2024
8UEO
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BU of 8ueo by Molmil
In-situ complex I (Active-Apo)
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CARDIOLIPIN, ...
Authors:Zheng, W, Zhu, J, Zhang, K.
Deposit date:2023-10-02
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 2024
8UEP
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BU of 8uep by Molmil
In-situ complex I, Active-Q10 (State-alpha)
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CARDIOLIPIN, ...
Authors:Zheng, W, Zhu, J, Zhang, K.
Deposit date:2023-10-02
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 2024
8UEQ
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BU of 8ueq by Molmil
In-situ complex I with Q10 (State-beta)
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CARDIOLIPIN, ...
Authors:Zheng, W, Zhu, J, Zhang, K.
Deposit date:2023-10-02
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 2024
8UER
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BU of 8uer by Molmil
In-situ complex I with Q10 (State-gamma)
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CARDIOLIPIN, ...
Authors:Zheng, W, Zhu, J, Zhang, K.
Deposit date:2023-10-02
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 2024
8UES
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BU of 8ues by Molmil
In-situ complex I, Deactive class01
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ...
Authors:Zheng, W, Zhu, J, Zhang, K.
Deposit date:2023-10-02
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 2024
8UET
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BU of 8uet by Molmil
In-situ complex I, Deactive class02
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ...
Authors:Zheng, W, Zhu, J, Zhang, K.
Deposit date:2023-10-02
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 2024
8UEU
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BU of 8ueu by Molmil
In-situ complex I, Deactive class03
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ...
Authors:Zheng, W, Zhu, J, Zhang, K.
Deposit date:2023-10-02
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 2024
8UEV
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BU of 8uev by Molmil
In-situ complex I, Deactive class04
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ...
Authors:Zheng, W, Zhu, J, Zhang, K.
Deposit date:2023-10-02
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 2024
8UEW
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BU of 8uew by Molmil
In-situ complex I, Deactive class05
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ...
Authors:Zheng, W, Zhu, J, Zhang, K.
Deposit date:2023-10-02
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 2024
8UEX
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BU of 8uex by Molmil
In-situ complex I, Deactive class06
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ...
Authors:Zheng, W, Zhu, J, Zhang, K.
Deposit date:2023-10-02
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 2024
8UEY
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BU of 8uey by Molmil
In-situ complex I, Deactive class07
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ...
Authors:Zheng, W, Zhu, J, Zhang, K.
Deposit date:2023-10-02
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 2024
8UEZ
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BU of 8uez by Molmil
In-situ complex I, Active-Q10 (State-delta)
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CARDIOLIPIN, ...
Authors:Zheng, W, Zhu, J, Zhang, K.
Deposit date:2023-10-02
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 2024
8UFB
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BU of 8ufb by Molmil
Eastern equine encephalitis virus (PE-6) VLP in complex with full-length VLDLR (asymmetric unit)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Capsid protein, ...
Authors:Adams, L.J, Fremont, D.H, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2023-10-04
Release date:2024-01-17
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (3.89 Å)
Cite:Structural and functional basis of VLDLR usage by Eastern equine encephalitis virus.
Cell, 187, 2024
8UFC
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BU of 8ufc by Molmil
Eastern equine encephalitis virus (PE-6) VLP in complex with VLDLR LA(1-2) (asymmetric unit)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Capsid protein, ...
Authors:Adams, L.J, Fremont, D.H, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2023-10-04
Release date:2024-01-17
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Structural and functional basis of VLDLR usage by Eastern equine encephalitis virus.
Cell, 187, 2024
8UFJ
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BU of 8ufj by Molmil
Structure of M. mazei GS(R167L-A168G) apo form
Descriptor: Glutamine synthetase, MAGNESIUM ION
Authors:Schumacher, M.A.
Deposit date:2023-10-04
Release date:2023-11-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:M. mazei glutamine synthetase and glutamine synthetase-GlnK1 structures reveal enzyme regulation by oligomer modulation.
Nat Commun, 14, 2023
8UGD
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BU of 8ugd by Molmil
In-situ complex III, state I
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CARDIOLIPIN, ...
Authors:Zheng, W, Zhang, K, Zhu, J.
Deposit date:2023-10-05
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 2024
8UGE
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BU of 8uge by Molmil
In-situ complex III, state II
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CARDIOLIPIN, ...
Authors:Zheng, W, Zhang, K, Zhu, J.
Deposit date:2023-10-05
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 2024
8UGF
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BU of 8ugf by Molmil
In-situ complex III, state III
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CARDIOLIPIN, ...
Authors:Zheng, W, Zhang, K, Zhu, J.
Deposit date:2023-10-05
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 2024
8UGG
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BU of 8ugg by Molmil
In-situ complex III, state IV
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CARDIOLIPIN, ...
Authors:Zheng, W, Zhang, K, Zhu, J.
Deposit date:2023-10-05
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 2024
8UGH
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In-situ structure of typeA supercomplex with lipids in respiratory chain (composite)
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, ...
Authors:Zheng, W, Zhang, K, Zhu, J.
Deposit date:2023-10-05
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (2.1 Å)
Cite:High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 2024
8UGI
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High resolution in-situ structure of typeA supercomplex in respiratory chain (I1III2IV1,composite)
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
Authors:Zheng, W, Zhang, K, Zhu, J.
Deposit date:2023-10-05
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (2.1 Å)
Cite:High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 2024
8UGJ
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BU of 8ugj by Molmil
In-situ structure of typeB supercomplex in respiratory chain (composite)
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
Authors:Zheng, W, Zhang, K, Zhu, J.
Deposit date:2023-10-05
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 2024
8UGK
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BU of 8ugk by Molmil
High resolution in-situ structure of complex III in respiratory supercomplex (composite)
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CARDIOLIPIN, ...
Authors:Zheng, W, Zhu, J, Zhang, K.
Deposit date:2023-10-05
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (2.1 Å)
Cite:High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 2024

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