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PDB形式変換不可の PDB エントリー
7JK9
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BU of 7jk9 by Molmil
Helical filaments of plant light-dependent protochlorophyllide oxidoreductase (LPOR) bound to NADPH, Pchlide, and membrane
分子名称: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Protochlorophyllide, ...
著者Nguyen, H.C, Gabruk, M, Frost, A.
登録日2020-07-28
公開日2021-03-17
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Photocatalytic LPOR forms helical lattices that shape membranes for chlorophyll synthesis.
Nat.Plants, 7, 2021
7JMF
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BU of 7jmf by Molmil
Functional Pathways of Biomolecules Retrieved from Single-particle Snapshots - Frame 42 - State 6 (S6)
分子名称: CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1B, ZINC ION, ...
著者Dashti, A, des Georges, A, Frank, J, Ourmazd, A.
登録日2020-07-31
公開日2020-08-12
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Retrieving functional pathways of biomolecules from single-particle snapshots.
Nat Commun, 11, 2020
7JMG
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BU of 7jmg by Molmil
Functional Pathways of Biomolecules Retrieved from Single-particle Snapshots - Frame 22 - State 2 (S2)
分子名称: CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1B, ZINC ION, ...
著者Dashti, A, des Georges, A, Frank, J, Ourmazd, A.
登録日2020-07-31
公開日2020-08-12
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Retrieving functional pathways of biomolecules from single-particle snapshots.
Nat Commun, 11, 2020
7JMH
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BU of 7jmh by Molmil
Functional Pathways of Biomolecules Retrieved from Single-particle Snapshots - Frame 35 - State 4 (S4)
分子名称: CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1B, ZINC ION, ...
著者Dashti, A, des Georges, A, Frank, J, Ourmazd, A.
登録日2020-07-31
公開日2020-08-12
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Retrieving functional pathways of biomolecules from single-particle snapshots.
Nat Commun, 11, 2020
7JMI
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BU of 7jmi by Molmil
Functional Pathways of Biomolecules Retrieved from Single-particle Snapshots - Frame 29 - State 3 (S3)
分子名称: CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1B, ZINC ION, ...
著者Dashti, A, des Georges, A, Frank, J, Ourmazd, A.
登録日2020-07-31
公開日2020-08-12
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Retrieving functional pathways of biomolecules from single-particle snapshots.
Nat Commun, 11, 2020
7JMJ
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BU of 7jmj by Molmil
Functional Pathways of Biomolecules Retrieved from Single-particle Snapshots - Frame 37 - State 5 (S5)
分子名称: CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1B, ZINC ION, ...
著者Dashti, A, des Georges, A, Frank, J, Ourmazd, A.
登録日2020-07-31
公開日2020-08-12
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Retrieving functional pathways of biomolecules from single-particle snapshots.
Nat Commun, 11, 2020
7JOQ
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BU of 7joq by Molmil
Structure of NV1 small terminase
分子名称: Small Terminase subunit
著者Cingolani, G, Lokareddy, R.
登録日2020-08-07
公開日2020-11-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.95 Å)
主引用文献Biophysical analysis of Pseudomonas-phage PaP3 small terminase suggests a mechanism for sequence-specific DNA-binding by lateral interdigitation.
Nucleic Acids Res., 48, 2020
7JQL
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BU of 7jql by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolution
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Mardirossian, M, Sola, R, Beckert, B, Valencic, E, Collis, D.W.P, Borisek, J, Armas, F, Di Stasi, A, Buchmann, J, Syroegin, E.A, Polikanov, Y.S, Magistrato, A, Hilpert, K, Wilson, D.N, Scocchi, M.
登録日2020-08-11
公開日2020-08-26
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Peptide Inhibitors of Bacterial Protein Synthesis with Broad Spectrum and SbmA-Independent Bactericidal Activity against Clinical Pathogens.
J.Med.Chem., 63, 2020
7JQM
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BU of 7jqm by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-002, mRNA, and deacylated P-site tRNA at 3.05A resolution
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Mardirossian, M, Sola, R, Beckert, B, Valencic, E, Collis, D.W.P, Borisek, J, Armas, F, Di Stasi, A, Buchmann, J, Syroegin, E.A, Polikanov, Y.S, Magistrato, A, Hilpert, K, Wilson, D.N, Scocchi, M.
登録日2020-08-11
公開日2020-08-26
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Peptide Inhibitors of Bacterial Protein Synthesis with Broad Spectrum and SbmA-Independent Bactericidal Activity against Clinical Pathogens.
J.Med.Chem., 63, 2020
7JQU
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BU of 7jqu by Molmil
Abeta 16-36 beta-hairpin mimic with E22G Arctic mutation
分子名称: Abeta 16-36 beta-hairpin mimic VAL-ORN-LYS-LEU-VAL-MEA-PHE-ALA-GLN-ORN-ALA-ILE-ILE-GLY-LEU-MET
著者Kreutzer, A.G, McKnelly, K.J, Nowick, J.S.
登録日2020-08-11
公開日2021-09-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.611 Å)
主引用文献Effects of Familial Alzheimer's Disease Mutations on the Assembly of a beta-Hairpin Peptide Derived from A beta 16-36 .
Biochemistry, 61, 2022
7JSS
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BU of 7jss by Molmil
ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-II)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Carbone, C.E, Korostelev, A.A.
登録日2020-08-15
公開日2020-11-11
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献ArfB can displace mRNA to rescue stalled ribosomes.
Nat Commun, 11, 2020
7JSW
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BU of 7jsw by Molmil
ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Carbone, C.E, Korostelev, A.A.
登録日2020-08-16
公開日2020-11-11
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献ArfB can displace mRNA to rescue stalled ribosomes.
Nat Commun, 11, 2020
7JSZ
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BU of 7jsz by Molmil
ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-IV)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Carbone, C.E, Korostelev, A.A.
登録日2020-08-16
公開日2020-11-11
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献ArfB can displace mRNA to rescue stalled ribosomes.
Nat Commun, 11, 2020
7JT1
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BU of 7jt1 by Molmil
70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Carbone, C.E, Korostelev, A.A.
登録日2020-08-16
公開日2020-11-11
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献ArfB can displace mRNA to rescue stalled ribosomes
Nat Commun, 11, 2020
7JT2
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BU of 7jt2 by Molmil
70S ribosome stalled on long mRNA with ArfB bound in the A site
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Carbone, C.E, Korostelev, A.A.
登録日2020-08-16
公開日2020-11-11
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献ArfB can displace mRNA to rescue stalled ribosomes
Nat Commun, 11, 2020
7JT3
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BU of 7jt3 by Molmil
Rotated 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound in the A site (+9-IV)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Carbone, C.E, Korostelev, A.A.
登録日2020-08-17
公開日2020-11-11
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献ArfB can displace mRNA to rescue stalled ribosomes
Nat Commun, 11, 2020
7JU4
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BU of 7ju4 by Molmil
Radial spoke 2 stalk, IDAc, and N-DRC attached with doublet microtubule
分子名称: 28 kDa inner dynein arm light chain, axonemal, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Gui, M, Ma, M, Sze-Tu, E, Wang, X, Koh, F, Zhong, E, Berger, B, Davis, J, Dutcher, S, Zhang, R, Brown, A.
登録日2020-08-19
公開日2020-12-16
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures of radial spokes and associated complexes important for ciliary motility.
Nat.Struct.Mol.Biol., 28, 2021
7K00
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BU of 7k00 by Molmil
Structure of the Bacterial Ribosome at 2 Angstrom Resolution
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Watson, Z.L, Ward, F.R, Meheust, R, Ad, O, Schepartz, A, Banfield, J.F, Cate, J.H.D.
登録日2020-09-02
公開日2020-09-23
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (1.98 Å)
主引用文献Structure of the bacterial ribosome at 2 angstrom resolution.
Elife, 9, 2020
7K0S
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BU of 7k0s by Molmil
Cryo-EM structure of rabbit RyR1 in the presence of Mg2+ and AMP-PCP in nanodisc
分子名称: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, RyR1, ...
著者Nayak, A.R, Samso, M.
登録日2020-09-05
公開日2021-09-22
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Interplay between Mg2+ and Ca2+ at multiple sites of the ryanodine receptor
Nat Commun, 15, 2024
7K0T
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BU of 7k0t by Molmil
Cryo-EM structure of rabbit RyR1 in the presence of AMP-PCP in nanodisc
分子名称: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, RyR1, ZINC ION
著者Nayak, A.R, Samso, M.
登録日2020-09-05
公開日2021-09-22
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Ca 2+ -inactivation of the mammalian ryanodine receptor type 1 in a lipidic environment revealed by cryo-EM.
Elife, 11, 2022
7K22
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BU of 7k22 by Molmil
Murine polyomavirus pentavalent capsomer with 8A7H5 Fab, subparticle reconstruction
分子名称: 8A7H5 Fab heavy chain, 8A7H5 Fab light chain, Capsid protein VP1
著者Goetschius, D.J, Hafenstein, S.L.
登録日2020-09-08
公開日2020-10-07
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Antibody escape by polyomavirus capsid mutation facilitates neurovirulence.
Elife, 9, 2020
7K23
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BU of 7k23 by Molmil
Murine polyomavirus hexavalent capsomer with 8A7H5 Fab, subparticle reconstruction
分子名称: 8A7H5 Fab heavy chain, 8A7H5 Fab light chain, Capsid protein VP1
著者Goetschius, D.J, Hafenstein, S.L.
登録日2020-09-08
公開日2020-10-07
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Antibody escape by polyomavirus capsid mutation facilitates neurovirulence.
Elife, 9, 2020
7K24
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BU of 7k24 by Molmil
Murine polyomavirus pentavalent capsomer, subparticle reconstruction
分子名称: Capsid protein VP1
著者Goetschius, D.J, Hafenstein, S.L.
登録日2020-09-08
公開日2020-10-07
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Antibody escape by polyomavirus capsid mutation facilitates neurovirulence.
Elife, 9, 2020
7K50
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BU of 7k50 by Molmil
Pre-translocation non-frameshifting(CCA-A) complex (Structure I)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Demo, G, Loveland, A.B, Svidritskiy, E, Gamper, H.B, Hou, Y.M, Korostelev, A.A.
登録日2020-09-16
公開日2021-07-28
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis for +1 ribosomal frameshifting during EF-G-catalyzed translocation.
Nat Commun, 12, 2021
7K51
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Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Demo, G, Loveland, A.B, Svidritskiy, E, Gamper, H.B, Hou, Y.M, Korostelev, A.A.
登録日2020-09-16
公開日2021-07-28
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural basis for +1 ribosomal frameshifting during EF-G-catalyzed translocation.
Nat Commun, 12, 2021

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